RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OR1L4Q8NGR5 311 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 NPIPB3Q92617 1050 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 IMMP2LQ96T52 175 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 SLC25A33Q9BSK2 321 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 IGKV1D-37A0A075B6S9 117 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 LY6LH3BQJ8 138 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 COX7A2P2O60397 106 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 SELENOTP62341 195 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 LCN2P80188 198 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 C4orf17Q53FE4 359 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 PPP1R27Q86WC6 154 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 OR4X1Q8NH49 305 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 BTF3L4Q96K17 158 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 SLC25A2Q9BXI2 301 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 LY96Q9Y6Y9 160 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 IFITM10A6NMD0 228 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 OR10J4P0C629 311 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 SFTPCP11686 197 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 LY6DQ14210 128 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 CLEC12BQ2HXU8 276 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 TEX38Q6PEX7 206 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 OCC1Q8TAD7 63 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 C22orf15Q8WYQ4 148 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 MISP3Q96FF7 219 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 RNF5Q99942 180 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 DNAJC4Q9NNZ3 241 aa10.46□□□□□ -0.74
GARNL3-220ENST00000496711 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.74
GARNL3-220ENST00000496711 A0A1W2PRE2 83 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 CORTO00230 105 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 IGHV3-48P01763 117 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 CRYGCP07315 174 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 HNF1AP20823 631 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 S100A2P29034 98 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 UBE2L3P68036 154 aaKnown RBP10.45□□□□□ -0.74
GARNL3-220ENST00000496711 ZNF90Q03938 601 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 C10orf113Q5VZT2 155 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 HCP5Q6MZN7 132 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 DTX2Q86UW9 622 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 HIST3H2BBQ8N257 126 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 OR5AU1Q8NGC0 362 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 FAM167A-AS1Q96KT0 104 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 SSBP3Q9BWW4 388 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-220ENST00000496711 GAR1Q9NY12 217 aaKnown RBP10.45□□□□□ -0.74
GARNL3-220ENST00000496711 NBASA2RRP1 2371 aa10.45□□□□□ -0.74
GARNL3-220ENST00000496711 GGTLC3B5MD39 225 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 M0R1W7 72 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 MFAP2P55001 183 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 PAX2Q02962 417 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 FOXL1Q12952 345 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 ACTL10Q5JWF8 245 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 MORN5Q5VZ52 161 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 OR11H6Q8NGC7 330 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 OR10G8Q8NGN5 311 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 OR1P1Q8NH06 330 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 EAF1Q96JC9 268 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-220ENST00000496711 FBXL15Q9H469 300 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 PRORYQ9H606 182 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 COL6A6A6NMZ7 2263 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 TEX22C9J3V5 150 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 K7EN84 100 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 CRYBB3P26998 211 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 HTR1DP28221 377 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 S100A12P80511 92 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 TNFRSF19Q9NS68 423 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 ZNF355PQ9NSJ1 428 aa10.44□□□□□ -0.74
GARNL3-220ENST00000496711 F11RQ9Y624 299 aaKnown RBP10.44□□□□□ -0.74
GARNL3-220ENST00000496711 HRNRQ86YZ3 2850 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-220ENST00000496711 LOC105371242A0A075B767 164 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 TRAV5A0A0B4J249 113 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 TIMM23O14925 209 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 MOSP00540 346 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 APELAP0DMC3 54 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 GNG4P50150 75 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 ARF6P62330 175 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 PLGLAQ15195 96 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 CENPWQ5EE01 88 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 GFI1BQ5VTD9 330 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 SGMS2Q8NHU3 365 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 SRSF12Q8WXF0 261 aaKnown RBP10.43□□□□□ -0.74
GARNL3-220ENST00000496711 TRGV9Q99603 122 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 PITPNC1Q9UKF7 332 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 ARHGAP32A7KAX9 2087 aa10.43□□□□□ -0.74
GARNL3-220ENST00000496711 HELTA6NFD8 242 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 CEACAM3P40198 252 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 LDLRAD2Q5SZI1 272 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 C19orf35Q6ZS72 473 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 PAXXQ9BUH6 204 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 GPR61Q9BZJ8 451 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 DPM3Q9P2X0 92 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 HIVEP3Q5T1R4 2406 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 A0A0U1RQK1 487 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 ZNF320A2RRD8 509 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 SUMO1P63165 101 aaKnown RBP10.42□□□□□ -0.74
GARNL3-220ENST00000496711 SSX2Q16385 188 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 PDZD11Q5EBL8 140 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 UNQ6494/PRO21346Q6UXR6 183 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms