RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 PVRIGQ6DKI7 326 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 FNDC4Q9H6D8 234 aaPredicted RBP9.49□□□□□ -0.89
USF1-207ENST00000496363 KLK11Q9UBX7 282 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 TRAV2A0A0B4J234 112 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 FAM25AB3EWG3 89 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 FAM25CB3EWG5 89 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 FAM25GB3EWG6 89 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 INS-IGF2F8WCM5 200 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 CD3DP04234 171 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 CD5P06127 495 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 RNASE10Q5GAN6 216 aaKnown RBP9.48□□□□□ -0.89
USF1-207ENST00000496363 STHQ8IWL8 128 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 Q8NAQ8 132 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 STXBP6Q8NFX7 210 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 OR4D10Q8NGI6 311 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 OR52I2Q8NH67 350 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 ZNF486Q96H40 463 aaPredicted RBP9.48□□□□□ -0.89
USF1-207ENST00000496363 KIAA1109Q2LD37 5005 aa9.48□□□□□ -0.89
USF1-207ENST00000496363 DYNC1H1Q14204 4646 aaKnown RBP9.48□□□□□ -0.89
USF1-207ENST00000496363 C3orf85A0A1B0GTC6 90 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 KNCNA6PVL3 124 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 K7EQG2 157 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 CLN5O75503 358 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 TNFAIP8O95379 198 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 RBMY1A1P0DJD3 496 aaKnown RBP9.47□□□□□ -0.89
USF1-207ENST00000496363 RBMY1CP0DJD4 496 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 C4BPBP20851 252 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 NPPCP23582 126 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 OPRK1P41145 380 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 P2RY1P47900 373 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 RBMY1FQ15415 496 aaKnown RBP9.47□□□□□ -0.89
USF1-207ENST00000496363 TIGITQ495A1 244 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 Q6ZRM9 215 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 TRPT1Q86TN4 253 aaKnown RBP9.47□□□□□ -0.89
USF1-207ENST00000496363 METTL26Q96S19 204 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 PDCD10Q9BUL8 212 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 TMEM231Q9H6L2 316 aa9.47□□□□□ -0.89
USF1-207ENST00000496363 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 IGKV1-17P01599 117 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 CRYBB3P26998 211 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 RORCP51449 518 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.9
USF1-207ENST00000496363 ARRDC1Q8N5I2 433 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 OR13C8Q8NGS7 320 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 OR4X1Q8NH49 305 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 RNASE11Q8TAA1 199 aaKnown RBP9.46□□□□□ -0.9
USF1-207ENST00000496363 NAA50Q9GZZ1 169 aaKnown RBP9.46□□□□□ -0.9
USF1-207ENST00000496363 ENY2Q9NPA8 101 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 COPZ2Q9P299 210 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 EXTL2Q9UBQ6 330 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
USF1-207ENST00000496363 A0A1W2PS18 150 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 IGLL5B9A064 214 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 CORTO00230 105 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 UCP1P25874 307 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 BSXQ3C1V8 233 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 SCGB2B2Q4G0G5 96 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 MARCH1Q8TCQ1 289 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 DCANP1Q8TF63 244 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 TMEM230Q96A57 120 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 ABHD1Q96SE0 405 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 CLEC5AQ9NY25 188 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 MTFP1Q9UDX5 166 aa9.45□□□□□ -0.9
USF1-207ENST00000496363 ATG12O94817 140 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 HLA-DMBP28068 263 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 RPL5P46777 297 aaKnown RBP9.44□□□□□ -0.9
USF1-207ENST00000496363 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 FAAP20Q6NZ36 180 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 MZT2AQ6P582 158 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 CCDC71LQ8N9Z2 235 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 RRNAD1Q96FB5 475 aaKnown RBP9.44□□□□□ -0.9
USF1-207ENST00000496363 GRAMD2BQ96HH9 432 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 X6R8D5 127 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 DNAH11Q96DT5 4516 aa9.44□□□□□ -0.9
USF1-207ENST00000496363 PKD1P98161 4303 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 ELOA3CA0A087WX78 387 aaPredicted RBP9.43□□□□□ -0.9
USF1-207ENST00000496363 ZNF705EA8MWA4 302 aaPredicted RBP9.43□□□□□ -0.9
USF1-207ENST00000496363 CD74P04233 296 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 OR5AC1P0C628 307 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 SPP1P10451 314 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 TBPP20226 339 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 SPCS3P61009 180 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 CTF1Q16619 201 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 MORN3Q6PF18 240 aaPredicted RBP9.43□□□□□ -0.9
USF1-207ENST00000496363 Q6ZTC4 211 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 TMEM229BQ8NBD8 167 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 TERB2Q8NHR7 220 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 ZFAND1Q8TCF1 268 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 HRH4Q9H3N8 390 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 U3KQE9 123 aa9.43□□□□□ -0.9
USF1-207ENST00000496363 NXPH3O95157 252 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 RAB3DO95716 219 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 IGLC1P0CG04 106 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 MIFP14174 115 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 ZNF182P17025 639 aaPredicted RBP9.42□□□□□ -0.9
USF1-207ENST00000496363 RND2P52198 227 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms