RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 PRRT1Q99946 306 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 NAA60Q9H7X0 242 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 CCDC59Q9P031 241 aaKnown RBP9.45□□□□□ -0.9
PTPRF-214ENST00000496043 RSL24D1Q9UHA3 163 aaKnown RBP9.45□□□□□ -0.9
PTPRF-214ENST00000496043 KCNIP3Q9Y2W7 256 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 IGKV3-7A0A075B6H7 116 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 JTBO76095 146 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
PTPRF-214ENST00000496043 MLANAQ16655 118 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 TCF24Q7RTU0 167 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 GBGT1Q8N5D6 347 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 OR4C16Q8NGL9 310 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 RBPMSQ93062 196 aaKnown RBP9.44□□□□□ -0.9
PTPRF-214ENST00000496043 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
PTPRF-214ENST00000496043 PUS1Q9Y606 427 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRF-214ENST00000496043 TRAV30A0A087WSZ9 112 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 A0A1W2PS18 150 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 CRYM-AS1A6NIL9 109 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 DNASE2O00115 360 aaPredicted RBP9.43□□□□□ -0.9
PTPRF-214ENST00000496043 GSTZ1O43708 216 aaPredicted RBP9.43□□□□□ -0.9
PTPRF-214ENST00000496043 NOL3O60936 208 aaKnown RBP9.43□□□□□ -0.9
PTPRF-214ENST00000496043 CLN5O75503 358 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 NPPCP23582 126 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 OPRK1P41145 380 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 HTR2BP41595 481 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 AARDQ4LEZ3 155 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 OR51S1Q8NGJ8 323 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 OR4X1Q8NH49 305 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM230Q96A57 120 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 RNF183Q96D59 192 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM231Q9H6L2 316 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 VSIRQ9H7M9 311 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 MAP6D1Q9H9H5 199 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 HEYLQ9NQ87 328 aaPredicted RBP9.43□□□□□ -0.9
PTPRF-214ENST00000496043 CACFD1Q9UGQ2 172 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 SCP2D1Q9UJQ7 156 aa9.43□□□□□ -0.9
PTPRF-214ENST00000496043 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 ANKRD20A5PA0PJZ0 165 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 FABP12A6NFH5 140 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 DFFBO76075 338 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 APOHP02749 345 aaPredicted RBP9.42□□□□□ -0.9
PTPRF-214ENST00000496043 TNFSF8P32971 234 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 RPL11P62913 178 aaKnown RBP9.42□□□□□ -0.9
PTPRF-214ENST00000496043 TNFRSF9Q07011 255 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM268Q5VZI3 342 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 LILRB2Q8N423 598 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 LHFPL5Q8TAF8 219 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 ST8SIA2Q92186 375 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 CSTL1Q9H114 145 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 FNDC4Q9H6D8 234 aaPredicted RBP9.42□□□□□ -0.9
PTPRF-214ENST00000496043 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 CACNG5Q9UF02 275 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM56-RWDD3S4R434 201 aa9.42□□□□□ -0.9
PTPRF-214ENST00000496043 IGHV3-66A0A0C4DH42 116 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 A0A0J9YWU9 116 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 A0A1B0GU03 582 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 CEBPZOSA8MTT3 80 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 C2orf83Q53S99 150 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 LYG2Q86SG7 212 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 NOXA1Q86UR1 476 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 IL22RA2Q969J5 263 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 METTL26Q96S19 204 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 SOSTQ9BQB4 213 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
PTPRF-214ENST00000496043 MS4A6AQ9H2W1 248 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 MRPL36Q9P0J6 103 aaKnown RBP9.41□□□□□ -0.9
PTPRF-214ENST00000496043 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 RYR2Q92736 4967 aa9.41□□□□□ -0.9
PTPRF-214ENST00000496043 TRAV2A0A0B4J234 112 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 MPTX1A8MV57 137 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 SLC25A4P12235 298 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM187Q14656 261 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 ZNF124Q15973 351 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 ETFRF1Q6IPR1 90 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 MCFD2Q8NI22 146 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
PTPRF-214ENST00000496043 Q8WTZ3 238 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 NARS2Q96I59 477 aaKnown RBP9.4□□□□□ -0.9
PTPRF-214ENST00000496043 MCUBQ9NWR8 336 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
PTPRF-214ENST00000496043 CXorf65A6NEN9 183 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 H3BMQ9 156 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 IGKV1-17P01599 117 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 SULT1A3P0DMM9 295 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 SULT1A4P0DMN0 295 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 AKR1C4P17516 323 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 ATF4P18848 351 aaPredicted RBP9.39□□□□□ -0.91
PTPRF-214ENST00000496043 CRYBB3P26998 211 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 TIGITQ495A1 244 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 GATAD1Q8WUU5 269 aa9.39□□□□□ -0.91
PTPRF-214ENST00000496043 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms