RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 HTR2BP41595 481 aa18.04■□□□□ 0.48
HLA-C-209ENST00000495835 ZNF600Q6ZNG1 722 aa18.04■□□□□ 0.48
HLA-C-209ENST00000495835 LHFPL5Q8TAF8 219 aa18.04■□□□□ 0.48
HLA-C-209ENST00000495835 RETNQ9HD89 108 aa18.04■□□□□ 0.48
HLA-C-209ENST00000495835 IGHV3OR16-8A0A075B7F1 116 aa18.03■□□□□ 0.48
HLA-C-209ENST00000495835 ZNF207O43670 478 aaKnown RBP18.03■□□□□ 0.48
HLA-C-209ENST00000495835 SCGB2A1O75556 95 aa18.03■□□□□ 0.48
HLA-C-209ENST00000495835 IGHV3-48P01763 117 aa18.03■□□□□ 0.48
HLA-C-209ENST00000495835 PIGBOS1A0A0B4J2F0 54 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 UBE2CO00762 179 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 APOC4P55056 127 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 TMEM268Q5VZI3 342 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 TOMM20LQ6UXN7 152 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 OR4X1Q8NH49 305 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 RNF2Q99496 336 aa18.02■□□□□ 0.48
HLA-C-209ENST00000495835 KIR2DL5BA0A0G2JN68 375 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 KIR2DL5BA0A0G2JPC4 375 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 FAUP35544 74 aaKnown RBP18.01■□□□□ 0.47
HLA-C-209ENST00000495835 ODF3L2Q3SX64 289 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 Q6ZWC4 215 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 KIR2DL5AQ8N109 375 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 KIR2DL5BQ8NHK3 375 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 DEDD2Q8WXF8 326 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 GPR146Q96CH1 333 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 TP53TG1Q9Y2A0 90 aa18.01■□□□□ 0.47
HLA-C-209ENST00000495835 SACSQ9NZJ4 4579 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 TRAV30A0A087WSZ9 112 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 RPS10-NUDT3A0A1W2PQS6 291 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 CLN5O75503 358 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 OPRK1P41145 380 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 PAFAH1B2P68402 229 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 TMEM187Q14656 261 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 FAM90A2PQ658T7 463 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 ZFAND6Q6FIF0 208 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 VSIRQ9H7M9 311 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 HEYLQ9NQ87 328 aaPredicted RBP18■□□□□ 0.47
HLA-C-209ENST00000495835 CACNG5Q9UF02 275 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 TENM2Q9NT68 2774 aa18■□□□□ 0.47
HLA-C-209ENST00000495835 AP3S2P59780 193 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 C2orf83Q53S99 150 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 NOXA1Q86UR1 476 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 WFDC3Q8IUB2 231 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 RNASEH2CQ8TDP1 164 aaKnown RBP17.99■□□□□ 0.47
HLA-C-209ENST00000495835 TMEM230Q96A57 120 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 OVOL2Q9BRP0 275 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 FNDC4Q9H6D8 234 aaPredicted RBP17.99■□□□□ 0.47
HLA-C-209ENST00000495835 ZFAND3Q9H8U3 227 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 MCUBQ9NWR8 336 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 UBQLN2Q9UHD9 624 aa17.99■□□□□ 0.47
HLA-C-209ENST00000495835 PUS1Q9Y606 427 aaKnown RBP eCLIP17.99■□□□□ 0.47
HLA-C-209ENST00000495835 ANXA3P12429 323 aa17.98■□□□□ 0.47
HLA-C-209ENST00000495835 SRPXP78539 464 aa17.98■□□□□ 0.47
HLA-C-209ENST00000495835 TMEM231Q9H6L2 316 aa17.98■□□□□ 0.47
HLA-C-209ENST00000495835 A0A0B4J2A0 478 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 A0A1W2PS18 150 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 SULT1A3P0DMM9 295 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 SULT1A4P0DMN0 295 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 SLC25A4P12235 298 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 SHPKQ9UHJ6 478 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 LYSTQ99698 3801 aa17.97■□□□□ 0.47
HLA-C-209ENST00000495835 TRAV2A0A0B4J234 112 aa17.96■□□□□ 0.47
HLA-C-209ENST00000495835 CEBPZOSA8MTT3 80 aa17.96■□□□□ 0.47
HLA-C-209ENST00000495835 S100A5P33763 92 aa17.96■□□□□ 0.47
HLA-C-209ENST00000495835 CCR6P51684 374 aa17.96■□□□□ 0.47
HLA-C-209ENST00000495835 NMSQ5H8A3 153 aa17.96■□□□□ 0.47
HLA-C-209ENST00000495835 STPG3Q8N7X2 389 aa17.96■□□□□ 0.47
HLA-C-209ENST00000495835 RYR2Q92736 4967 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 LCE6AA0A183 80 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 ZNF701M0R085 212 aaPredicted RBP17.95■□□□□ 0.46
HLA-C-209ENST00000495835 NPPCP23582 126 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 KLF9Q13886 244 aaPredicted RBP17.95■□□□□ 0.46
HLA-C-209ENST00000495835 ETFRF1Q6IPR1 90 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 TCF24Q7RTU0 167 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 TOMM5Q8N4H5 51 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 SLC24A4Q8NFF2 622 aa17.95■□□□□ 0.46
HLA-C-209ENST00000495835 IGHV3-49A0A0A0MS15 119 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 A0A1B0GU03 582 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 CCDC160A6NGH7 325 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 AKR1C4P17516 323 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 ATP5IP56385 69 aaPredicted RBP17.94■□□□□ 0.46
HLA-C-209ENST00000495835 SUPT4H1P63272 117 aaKnown RBP17.94■□□□□ 0.46
HLA-C-209ENST00000495835 MLANAQ16655 118 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 PYDC2Q56P42 97 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 LGI3Q8N145 548 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 ST8SIA2Q92186 375 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 TRIM63Q969Q1 353 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 MRPL36Q9P0J6 103 aaKnown RBP17.94■□□□□ 0.46
HLA-C-209ENST00000495835 V9GYH0 126 aa17.94■□□□□ 0.46
HLA-C-209ENST00000495835 SPRY2O43597 315 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 DFFBO76075 338 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 SMCO1Q147U7 214 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 TMEM128Q5BJH2 165 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 METTL26Q96S19 204 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 SLC25A21Q9BQT8 299 aaPredicted RBP17.93■□□□□ 0.46
HLA-C-209ENST00000495835 MAP6D1Q9H9H5 199 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 HSPB7Q9UBY9 170 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 U3KQ87 197 aa17.93■□□□□ 0.46
HLA-C-209ENST00000495835 IGHV3OR16-13A0A075B7E8 117 aa17.92■□□□□ 0.46
HLA-C-209ENST00000495835 IGHV3-74A0A0B4J1X5 117 aa17.92■□□□□ 0.46
HLA-C-209ENST00000495835 DUXBA0A1W2PPF3 345 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms