RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 MGAT4CQ9UBM8 478 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 WNK1Q9H4A3 2382 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
HDAC6-235ENST00000495515 GNG7O60262 68 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 S100A10P60903 97 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 FAM106AQ4KMX7 169 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 C11orf87Q6NUJ2 197 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 C1QL4Q86Z23 238 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 TMEM170AQ8WVE7 144 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 DLX4Q92988 240 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-235ENST00000495515 NMES1Q9C002 83 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 MED28Q9H204 178 aa13.14□□□□□ -0.31
HDAC6-235ENST00000495515 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
HDAC6-235ENST00000495515 C15orf62A8K5M9 175 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 K7EPK0 472 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 TSC22D2O75157 780 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 OR2C1O95371 312 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 SIX6O95475 246 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 GPX4P36969 197 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-235ENST00000495515 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-235ENST00000495515 GPHB5Q86YW7 130 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 ELOVL1Q9BW60 279 aa13.13□□□□□ -0.31
HDAC6-235ENST00000495515 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-235ENST00000495515 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
HDAC6-235ENST00000495515 TRAV30A0A087WSZ9 112 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 H3BP45 60 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 IGHV3-48P01763 117 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 RLN2P04090 185 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-235ENST00000495515 CD69Q07108 199 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 IL15RAQ13261 267 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 CACNG8Q8WXS5 425 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 OR4C12Q96R67 309 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 PEMTQ9UBM1 199 aa13.12□□□□□ -0.31
HDAC6-235ENST00000495515 F8W735 103 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-235ENST00000495515 CLN5O75503 358 aa13.11□□□□□ -0.31
HDAC6-235ENST00000495515 RAB32Q13637 225 aa13.11□□□□□ -0.31
HDAC6-235ENST00000495515 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
HDAC6-235ENST00000495515 SLC16A13Q7RTY0 426 aa13.11□□□□□ -0.31
HDAC6-235ENST00000495515 SLC35E1Q96K37 410 aa13.11□□□□□ -0.31
HDAC6-235ENST00000495515 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
HDAC6-235ENST00000495515 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 LGALS9O00182 355 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
HDAC6-235ENST00000495515 TMEM50AO95807 157 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 CTSGP08311 255 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 PET100P0DJ07 73 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 IGLL1P15814 213 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 INSL3P51460 131 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 BCAP31P51572 246 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 PAX9P55771 341 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 H2BFSP57053 126 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 MLANAQ16655 118 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 PRSS54Q6PEW0 395 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 OR9G4Q8NGQ1 327 aa13.1□□□□□ -0.31
HDAC6-235ENST00000495515 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 CAV2P51636 162 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 RND2P52198 227 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 TMEM14EPQ6UXP3 125 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 REC114Q7Z4M0 266 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 CHRDL1Q9BU40 450 aa13.09□□□□□ -0.31
HDAC6-235ENST00000495515 MGAM2Q2M2H8 2515 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 NDUFA4O00483 81 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 DEDDO75618 318 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 ADMP35318 185 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-235ENST00000495515 FCN2Q15485 313 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 OR10P1Q8NGE3 313 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 OR1S2Q8NGQ3 325 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 ASB13Q8WXK3 278 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 NPIPB3Q92617 1050 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 ZNF436Q9C0F3 470 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-235ENST00000495515 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.32
HDAC6-235ENST00000495515 UFC1Q9Y3C8 167 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
HDAC6-235ENST00000495515 VWFP04275 2813 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 IGHV3-35A0A0C4DH35 117 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 E5RGE8 158 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 SAP30O75446 220 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 METTL15P1P0C7V9 234 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 OR10J1P30954 320 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 OR8G2PQ6IF36 304 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 ZNF600Q6ZNG1 722 aa13.07□□□□□ -0.32
HDAC6-235ENST00000495515 MRPL36Q9P0J6 103 aaKnown RBP13.07□□□□□ -0.32
HDAC6-235ENST00000495515 YIF1AO95070 293 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 FABP1P07148 127 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 CXCL3P19876 107 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 ELLP55199 621 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-235ENST00000495515 GAMTQ14353 236 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 OXLD1Q5BKU9 147 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 STX12Q86Y82 276 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms