RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	BET1L	Q9NYM9	111 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	PKDREJ	Q9NTG1	2253 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	MBD3L3	A6NE82	208 aa	Predicted RBP	10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	BMPR1B	O00238	502 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ZNF324	O75467	553 aa	Predicted RBP	10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	HSBP1	O75506	76 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	BPIFB3	P59826	476 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	C10orf55	Q5SWW7	151 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SGK494	Q96LW2	274 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	MRPL32	Q9BYC8	188 aa	Known RBP	10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	WNT10A	Q9GZT5	417 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	RNF114	Q9Y508	228 aa		10.93	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ATP5I	P56385	69 aa	Predicted RBP	10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ZNF788	Q6ZQV5	615 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ATOH7	Q8N100	152 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	OSR1	Q8TAX0	266 aa	Predicted RBP	10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	BLNK	Q8WV28	456 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	NCOR1P1	Q9H4R4	102 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SSUH2	Q9Y2M2	353 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	GOLT1B	Q9Y3E0	138 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	BDP1	A6H8Y1	2624 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	TM4SF5	O14894	197 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	UBE2G1	P62253	170 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	TMEM208	Q9BTX3	173 aa		10.92	□□□□□ -0.66
SUPT20H-222	ENST00000495071	IZUMO1R	A6ND01	250 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ORM2	P19652	201 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SUB1	P53999	127 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071		Q6ZN92	141 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	FAM168A	Q92567	244 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	IGLV3-9	A0A075B6K5	115 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ENSA	O43768	121 aa	Known RBP	10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	FTH1P19	P0C7X4	201 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	GATA4	P43694	442 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	TFPI2	P48307	235 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	OR1L4	Q8NGR5	311 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	CACNG8	Q8WXS5	425 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	REG1A	P05451	166 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	FAM222B	Q8WU58	562 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SLC25A2	Q9BXI2	301 aa		10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.91	□□□□□ -0.66
SUPT20H-222	ENST00000495071		A0A1W2PN81	502 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	DPRX	A6NFQ7	191 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	HNRNPA3	P51991	378 aa	Known RBP	10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SSBP2	P81877	361 aa	Predicted RBP	10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	IGFL2	Q6UWQ7	119 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ZNF714	Q96N38	554 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	LINC00312	Q9Y6C7	94 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	ABCA1	O95477	2261 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SMIM27	A0A1W2PRY6	76 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	PEX7	O00628	323 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	IGLV2-8	P01709	118 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	TNFRSF1A	P19438	455 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	RNASEK	Q6P5S7	137 aa	Known RBP	10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	WFDC8	Q8IUA0	241 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SLC25A5	P05141	298 aa	Known RBP	10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	C3orf79	P0CE67	100 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	GNG5	P63218	68 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	SLA	Q13239	276 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	PRR31	Q5SQ13	230 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	IGF2BP2-AS1	Q96M15	143 aa		10.9	□□□□□ -0.66
SUPT20H-222	ENST00000495071	DLEU1	O43261	78 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	APELA	P0DMC3	54 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	CD40	P25942	277 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	COL5A1-AS1	Q5SY13	56 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LHFPL4	Q7Z7J7	247 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	CCL17	Q92583	94 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NDUFA4L2	Q9NRX3	87 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071		E7EUB6	86 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071		H0YJW9	148 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	GPR6	P46095	362 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	COMP	P49747	757 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MMD	Q15546	238 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TMEM30B	Q3MIR4	351 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C1orf185	Q5T7R7	199 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PDPN	Q86YL7	162 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	OR1B1	Q8NGR6	318 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	VSTM2A	Q8TAG5	236 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TSKU	Q8WUA8	353 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	FAM167A-AS1	Q96KT0	104 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SAP30L	Q9HAJ7	183 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LPAR2	Q9HBW0	351 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TBR1	Q16650	682 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PNKD	Q8N490	385 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	OR4C13	Q8NGP0	309 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	UQCR10	Q9UDW1	63 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PCNX1	Q96RV3	2341 aa		10.89	□□□□□ -0.67
SUPT20H-222	ENST00000495071		M0R2Z0	102 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SLC25A17	O43808	307 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MOS	P00540	346 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	HCP5	Q6MZN7	132 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LINC00305	Q7Z4B0	112 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NUDT10	Q8NFP7	164 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NUDT11	Q96G61	164 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	FAM215A	Q9Y5M1	114 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TTC28	Q96AY4	2481 aa		10.88	□□□□□ -0.67

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