RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 CTSGP08311 255 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 ADMP35318 185 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 UNQ9165/PRO28630Q6UXU0 137 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 RNASEH2CQ8TDP1 164 aaKnown RBP12.35□□□□□ -0.43
YIF1A-209ENST00000494836 ZNF431Q8TF32 576 aaPredicted RBP12.35□□□□□ -0.43
YIF1A-209ENST00000494836 TMEM170AQ8WVE7 144 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 SEC22CQ9BRL7 303 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
YIF1A-209ENST00000494836 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
YIF1A-209ENST00000494836 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
YIF1A-209ENST00000494836 TMEM213A2RRL7 107 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 MPTX1A8MV57 137 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 K7EIL1 84 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 SPNP16150 400 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 ATP5IP56385 69 aaPredicted RBP12.34□□□□□ -0.43
YIF1A-209ENST00000494836 RELQ04864 619 aaPredicted RBP12.34□□□□□ -0.43
YIF1A-209ENST00000494836 NRARPQ7Z6K4 114 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 DYNLRB2Q8TF09 96 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 CIB3Q96Q77 187 aaPredicted RBP12.34□□□□□ -0.43
YIF1A-209ENST00000494836 PRR25Q96S07 402 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
YIF1A-209ENST00000494836 NDUFA4O00483 81 aa12.33□□□□□ -0.44
YIF1A-209ENST00000494836 SYNGR2O43760 224 aa12.33□□□□□ -0.44
YIF1A-209ENST00000494836 IAPPP10997 89 aa12.33□□□□□ -0.44
YIF1A-209ENST00000494836 FOLR2P14207 255 aa12.33□□□□□ -0.44
YIF1A-209ENST00000494836 IAH1Q2TAA2 248 aaPredicted RBP12.33□□□□□ -0.44
YIF1A-209ENST00000494836 SORL1Q92673 2214 aa12.33□□□□□ -0.44
YIF1A-209ENST00000494836 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 IFNA4P05014 189 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 IL5P05113 134 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 SLC25A4P12235 298 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 EDN2P20800 178 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 CBLN1P23435 193 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
YIF1A-209ENST00000494836 ELLP55199 621 aaPredicted RBP12.32□□□□□ -0.44
YIF1A-209ENST00000494836 MLANAQ16655 118 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 TM4SF20Q53R12 229 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 ETFRF1Q6IPR1 90 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 ADAMTSL5Q6ZMM2 481 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 C12orf45Q8N5I9 185 aaPredicted RBP12.32□□□□□ -0.44
YIF1A-209ENST00000494836 UXS1Q8NBZ7 420 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 OR4D5Q8NGN0 318 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 OR4X1Q8NH49 305 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 CACNG8Q8WXS5 425 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 MARC2Q969Z3 335 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 C20orf24Q9BUV8 137 aa12.32□□□□□ -0.44
YIF1A-209ENST00000494836 DAZ1Q9NQZ3 744 aaKnown RBP12.32□□□□□ -0.44
YIF1A-209ENST00000494836 MRPL36Q9P0J6 103 aaKnown RBP12.32□□□□□ -0.44
YIF1A-209ENST00000494836 WRBO00258 174 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 CLN5O75503 358 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 YIF1AO95070 293 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 GP9P14770 177 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 ID3Q02535 119 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 DCTN2Q13561 401 aaKnown RBP12.31□□□□□ -0.44
YIF1A-209ENST00000494836 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 OR2K2Q8NGT1 345 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 OR10C1Q96KK4 312 aa12.31□□□□□ -0.44
YIF1A-209ENST00000494836 TECRQ9NZ01 308 aaKnown RBP12.31□□□□□ -0.44
YIF1A-209ENST00000494836 IGHV3OR16-8A0A075B7F1 116 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 C15orf62A8K5M9 175 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 FAM25EA8MYX2 175 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 CCSO14618 274 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 TMEM50AO95807 157 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 RND2P52198 227 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
YIF1A-209ENST00000494836 RAB11AP62491 216 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 RPP30P78346 268 aaKnown RBP12.3□□□□□ -0.44
YIF1A-209ENST00000494836 PRSS54Q6PEW0 395 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 SLC16A13Q7RTY0 426 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 ZBTB8BQ8NAP8 495 aaPredicted RBP12.3□□□□□ -0.44
YIF1A-209ENST00000494836 GPN1Q9HCN4 374 aaPredicted RBP12.3□□□□□ -0.44
YIF1A-209ENST00000494836 MRPL27Q9P0M9 148 aaKnown RBP12.3□□□□□ -0.44
YIF1A-209ENST00000494836 GSKIPQ9P0R6 139 aa12.3□□□□□ -0.44
YIF1A-209ENST00000494836 PAIP2BQ9ULR5 123 aaKnown RBP12.3□□□□□ -0.44
YIF1A-209ENST00000494836 INMT-MINDY4F8WBC2 141 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 SSSCA1O60232 199 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 PRAF2O60831 178 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 SCGB1D2O95969 90 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 CD69Q07108 199 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 DEFB114Q30KQ6 69 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 CD300EQ496F6 205 aaPredicted RBP12.29□□□□□ -0.44
YIF1A-209ENST00000494836 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 ZNF600Q6ZNG1 722 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 ACY3Q96HD9 319 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 ZNF414Q96IQ9 312 aa12.29□□□□□ -0.44
YIF1A-209ENST00000494836 TRAV30A0A087WSZ9 112 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 H3BP45 60 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 K7EMT4 169 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 C8orf88P0DMB2 117 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 BTNL8Q6UX41 500 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 MLXQ9UH92 298 aa12.28□□□□□ -0.44
YIF1A-209ENST00000494836 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.45
YIF1A-209ENST00000494836 SNRPGP15A8MWD9 76 aa12.27□□□□□ -0.45
YIF1A-209ENST00000494836 ZNF207O43670 478 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms