RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 MEF2DQ14814 521 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 PVRIGQ6DKI7 326 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 LAMTOR1Q6IAA8 161 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 SELENOHQ8IZQ5 122 aaKnown RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 SLC35G3Q8N808 338 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 CCDC71LQ8N9Z2 235 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM116Q8NCL8 245 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 OR51S1Q8NGJ8 323 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 RAB2BQ8WUD1 216 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 C15orf40Q8WUR7 153 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 GPR146Q96CH1 333 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 TXN2Q99757 166 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 SLIRPQ9GZT3 109 aaKnown RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 C6orf62Q9GZU0 229 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 NAA60Q9H7X0 242 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 CCDC59Q9P031 241 aaKnown RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 GPR132Q9UNW8 380 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 CRYM-AS1A6NIL9 109 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 DISC1C4P0D8 188 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 H3BMQ9 156 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 CTDSPLO15194 276 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 CDS2O95674 445 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 GHRHP01286 108 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 AKAIN1P0CW23 69 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 TNFSF8P32971 234 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 NPBWR1P48145 328 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 MRPS10P82664 201 aaKnown RBP6.31□□□□□ -1.4
LRCH3-219ENST00000494069 SSBP1Q04837 148 aaKnown RBP6.31□□□□□ -1.4
LRCH3-219ENST00000494069 DEFB135Q30KP9 77 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM268Q5VZI3 342 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 DUSP18Q8NEJ0 188 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 RNASE11Q8TAA1 199 aaKnown RBP6.31□□□□□ -1.4
LRCH3-219ENST00000494069 ST8SIA2Q92186 375 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM230Q96A57 120 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 RRNAD1Q96FB5 475 aaKnown RBP6.31□□□□□ -1.4
LRCH3-219ENST00000494069 SOSTQ9BQB4 213 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 PDCD10Q9BUL8 212 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM222Q9H0R3 208 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
LRCH3-219ENST00000494069 C14orf166Q9Y224 244 aaKnown RBP6.31□□□□□ -1.4
LRCH3-219ENST00000494069 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRCH3-219ENST00000494069 ANKRD20A5PA0PJZ0 165 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 GSTZ1O43708 216 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-219ENST00000494069 DFFBO76075 338 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 ATG12O94817 140 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 RPL5P46777 297 aaKnown RBP6.3□□□□□ -1.4
LRCH3-219ENST00000494069 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 TCF24Q7RTU0 167 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 FAM24BQ8N5W8 94 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM170AQ8WVE7 144 aa6.3□□□□□ -1.4
LRCH3-219ENST00000494069 RBPMSQ93062 196 aaKnown RBP6.3□□□□□ -1.4
LRCH3-219ENST00000494069 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 FABP12A6NFH5 140 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 SPRY2O43597 315 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 CLN5O75503 358 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 IGKV1-17P01599 117 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 OPRK1P41145 380 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
LRCH3-219ENST00000494069 APOC4P55056 127 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 SPCS3P61009 180 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 DHODHQ02127 395 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM187Q14656 261 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 SURF2Q15527 256 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-219ENST00000494069 TIGITQ495A1 244 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 AARDQ4LEZ3 155 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 OR4X1Q8NH49 305 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 OR52E5Q8NH55 327 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 MCFD2Q8NI22 146 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 BCL7BQ9BQE9 202 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 VSIRQ9H7M9 311 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 ENY2Q9NPA8 101 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-219ENST00000494069 MCUBQ9NWR8 336 aa6.29□□□□□ -1.4
LRCH3-219ENST00000494069 CEBPZOSA8MTT3 80 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 CORTO00230 105 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 B3GALNT1O75752 331 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 AKR1C4P17516 323 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-219ENST00000494069 SUPT4H1P63272 117 aaKnown RBP6.28□□□□□ -1.4
LRCH3-219ENST00000494069 PMS2P11Q13670 270 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 RBMS2Q15434 407 aaKnown RBP6.28□□□□□ -1.4
LRCH3-219ENST00000494069 LEMD1Q68G75 181 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 PRSS54Q6PEW0 395 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 Q6ZWC4 215 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 LYZL2Q7Z4W2 148 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 LYG2Q86SG7 212 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 FAM219AQ8IW50 185 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 RNF183Q96D59 192 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 GALNT14Q96FL9 552 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 PRRT1Q99946 306 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 GINS3Q9BRX5 216 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms