RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DISC1C4P0D8 188 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 GABARAPH6UMI1 98 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 ATF4P18848 351 aaPredicted RBP9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 NPPCP23582 126 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 OPRK1P41145 380 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 SSBP1Q04837 148 aaKnown RBP9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 MEF2DQ14814 521 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 Q6ZRM9 215 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 GPR141Q7Z602 305 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 FAM219AQ8IW50 185 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 OR13C8Q8NGS7 320 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 LHFPL5Q8TAF8 219 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 TMEM230Q96A57 120 aa9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 PUS1Q9Y606 427 aaKnown RBP eCLIP9.9□□□□□ -0.82
CTDSP1-212ENST00000494067 TRAV30A0A087WSZ9 112 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 DFFBO76075 338 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 TMEM50AO95807 157 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 LY6G6CO95867 125 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 APOHP02749 345 aaPredicted RBP9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 UCP1P25874 307 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 ETV6P41212 452 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 PVRIGQ6DKI7 326 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 LILRB2Q8N423 598 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 MARCH1Q8TCQ1 289 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 GATAD1Q8WUU5 269 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 RABL2AQ9UBK7 228 aaPredicted RBP9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 CACFD1Q9UGQ2 172 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 RABL2BQ9UNT1 228 aa9.89□□□□□ -0.83
CTDSP1-212ENST00000494067 RNASE2P10153 161 aaKnown RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 HTR2BP41595 481 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 EIF2B2P49770 351 aaKnown RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 SPCS3P61009 180 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 DHODHQ02127 395 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 SURF2Q15527 256 aaPredicted RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 MLANAQ16655 118 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 CEMP1Q6PRD7 247 aaPredicted RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 GRAMD2BQ96HH9 432 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 METTL26Q96S19 204 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 RARRES2Q99969 163 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 RTBDNQ9BSG5 229 aaPredicted RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 MRPS26Q9BYN8 205 aaKnown RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 FNDC4Q9H6D8 234 aaPredicted RBP9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 VSIRQ9H7M9 311 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
CTDSP1-212ENST00000494067 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 CLN5O75503 358 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 AKAIN1P0CW23 69 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 RPL5P46777 297 aaKnown RBP9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 IL18Q14116 193 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 NOXA1Q86UR1 476 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 OR4X1Q8NH49 305 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 OR52E5Q8NH55 327 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 DYNC2LI1Q8TCX1 351 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 ST8SIA2Q92186 375 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 RBPMSQ93062 196 aaKnown RBP9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 TMEM222Q9H0R3 208 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 MS4A6AQ9H2W1 248 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 HEYLQ9NQ87 328 aaPredicted RBP9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 RABAC1Q9UI14 185 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 KCNIP3Q9Y2W7 256 aa9.87□□□□□ -0.83
CTDSP1-212ENST00000494067 IGHV3-66A0A0C4DH42 116 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 A0A1B0GU03 582 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 CEBPZOSA8MTT3 80 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 CDS2O95674 445 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 OR5AC1P0C628 307 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 DEFB131AP59861 70 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 ETFRF1Q6IPR1 90 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 STHQ8IWL8 128 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 FAM24BQ8N5W8 94 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 OR4C16Q8NGL9 310 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 LINC00476Q8WZB0 136 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 DIRAS2Q96HU8 199 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 SCGB3A2Q96PL1 93 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 PRRT1Q99946 306 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 MFFQ9GZY8 342 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 NAA60Q9H7X0 242 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 PRR13Q9NZ81 148 aa9.86□□□□□ -0.83
CTDSP1-212ENST00000494067 NOL3O60936 208 aaKnown RBP9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 CA1P00915 261 aaPredicted RBP9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 SLC25A4P12235 298 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 TMEM187Q14656 261 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 BSXQ3C1V8 233 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 CLVS1Q8IUQ0 354 aaPredicted RBP9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 Q8WTZ3 238 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 GLYATL2Q8WU03 294 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 TMEM170AQ8WVE7 144 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 SMIM4Q8WVI0 70 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 SCP2D1Q9UJQ7 156 aa9.85□□□□□ -0.83
CTDSP1-212ENST00000494067 PIGBOS1A0A0B4J2F0 54 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 CTDSPLO15194 276 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 IFNA4P05014 189 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 AP2S1P53680 142 aaPredicted RBP9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 AARDQ4LEZ3 155 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 TMEM41BQ5BJD5 291 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 TMEM268Q5VZI3 342 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 LEMD1Q68G75 181 aa9.84□□□□□ -0.83
CTDSP1-212ENST00000494067 SELENOHQ8IZQ5 122 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms