RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MED28Q9H204 178 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 ZP3P21754 424 aa13.71□□□□□ -0.21
PDLIM7-208ENST00000493815 MFAP4P55083 255 aa13.71□□□□□ -0.21
PDLIM7-208ENST00000493815 SYNJ2BPP57105 145 aa13.71□□□□□ -0.21
PDLIM7-208ENST00000493815 RNASEH2CQ8TDP1 164 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-208ENST00000493815 SMIM8Q96KF7 97 aa13.71□□□□□ -0.21
PDLIM7-208ENST00000493815 CHRDL1Q9BU40 450 aa13.71□□□□□ -0.21
PDLIM7-208ENST00000493815 IGLL1P15814 213 aa13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 NOXA1Q86UR1 476 aa13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 WFDC9Q8NEX5 89 aa13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 OR11H7Q8NGC8 314 aa13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 RAB40CQ96S21 281 aa13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 STRAPQ9Y3F4 350 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 NOTCH3Q9UM47 2321 aa13.7□□□□□ -0.22
PDLIM7-208ENST00000493815 TGOLN2O43493 480 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 CCNKO75909 580 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 ADMP35318 185 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 KLF5Q13887 457 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 NMES1Q9C002 83 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 L7N2F9 121 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 CTSGP08311 255 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 RAB11AP62491 216 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 VAMP2P63027 116 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 PRSS54Q6PEW0 395 aa13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 BSCL2Q96G97 398 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-208ENST00000493815 RPS10-NUDT3A0A1W2PQS6 291 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 OVOL1O14753 267 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 GNG7O60262 68 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 METTL15P1P0C7V9 234 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 RND2P52198 227 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 ATP5IP56385 69 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 CD69Q07108 199 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 OXLD1Q5BKU9 147 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 FAM209BQ5JX69 171 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 OR8G2PQ6IF36 304 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 SLC16A13Q7RTY0 426 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 PPP1R1CQ8WVI7 109 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 ACY3Q96HD9 319 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 C11orf1Q9H5F2 150 aa13.68□□□□□ -0.22
PDLIM7-208ENST00000493815 IGHV3OR16-8A0A075B7F1 116 aa13.67□□□□□ -0.22
PDLIM7-208ENST00000493815 NPBWR1P48145 328 aa13.67□□□□□ -0.22
PDLIM7-208ENST00000493815 BCAP31P51572 246 aa13.67□□□□□ -0.22
PDLIM7-208ENST00000493815 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
PDLIM7-208ENST00000493815 OR5AC2Q9NZP5 309 aa13.67□□□□□ -0.22
PDLIM7-208ENST00000493815 ZNF320A2RRD8 509 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 PRSS46E5RG02 174 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 H0YIZ8 118 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 TSC22D2O75157 780 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 LY86O95711 162 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 FCGR2BP31994 310 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 CAV2P51636 162 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 TAS2R30P59541 319 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 CYCSP99999 105 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 TMEM14EPQ6UXP3 125 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 UNQ9165/PRO28630Q6UXU0 137 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 OR4X1Q8NH49 305 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 TXN2Q99757 166 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 G3V4G9 280 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 CLN5O75503 358 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 DEDDO75618 318 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 EDN2P20800 178 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 GAMTQ14353 236 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 ETFRF1Q6IPR1 90 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 SPSB3Q6PJ21 355 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 C1QL4Q86Z23 238 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
PDLIM7-208ENST00000493815 PMS2P5A8MQ11 134 aa13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 SEC14L6B5MCN3 397 aa13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 SLC25A4P12235 298 aa13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 PVALBP20472 110 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 GAR1Q9NY12 217 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-208ENST00000493815 NBEAL1Q6ZS30 2694 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 TIGITQ495A1 244 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 ACOT7LQ6ZUV0 252 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 HAPLN4Q86UW8 402 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 GPHB5Q86YW7 130 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 RCC1LQ96I51 464 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 ZNF436Q9C0F3 470 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-208ENST00000493815 CST7O76096 145 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 YIF1AO95070 293 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 MPC2O95563 127 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 FAM106AQ4KMX7 169 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 RNF126Q9BV68 326 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 IGSF23A1L1A6 192 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 ZNF207O43670 478 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 SAP30O75446 220 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 RLN2P04090 185 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms