RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FGF22Q9HCT0 170 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 LIN7CQ9NUP9 197 aaKnown RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 DUSP13Q9UII6 198 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 ATP23Q9Y6H3 246 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 A0A1W2PQU0 124 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM262E9PQX1 116 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 HSPB6O14558 160 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 CLPSP04118 112 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 IGHV4-34P06331 123 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 NHLRC4P0CG21 123 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-205ENST00000493587 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 OR4C3Q8NH37 302 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 NUDT22Q9BRQ3 303 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 NPCDR1Q9BY65 106 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 EDA2RQ9HAV5 297 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF355PQ9NSJ1 428 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 C1RLQ9NZP8 487 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 GNG5P63218 68 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 RPS21P63220 83 aaKnown RBP5.67□□□□□ -1.5
VPS13B-205ENST00000493587 WIPI1Q5MNZ9 446 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-205ENST00000493587 PPP1R32Q7Z5V6 425 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 PCP2Q8IVA1 136 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 C1orf210Q8IVY1 113 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 DEPPQ9NTK1 212 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 HCFC1P51610 2035 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 TRAV8-1A0A0A6YYK1 113 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 IGLV1-36A0A0B4J1U3 117 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 PSMB2P49721 201 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 SPINK9Q5DT21 86 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 DUX4L9Q6RFH8 374 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-205ENST00000493587 LINC00114Q6XXX2 140 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 VN1R4Q7Z5H5 301 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 C17orf82Q86X59 251 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-205ENST00000493587 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 IL1F10Q8WWZ1 152 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 TXNDC17Q9BRA2 123 aa5.67□□□□□ -1.5
VPS13B-205ENST00000493587 CENPVL3A0A0U1RRI6 287 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 IGLL5B9A064 214 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 PVRP15151 417 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 OPRK1P41145 380 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 FAM19A5Q7Z5A7 132 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-205ENST00000493587 PPP1R27Q86WC6 154 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 CCL4L1Q8NHW4 92 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 SPANXA1Q9NS26 97 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 CT62P0C5K7 136 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 ZXDAP98168 799 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS13B-205ENST00000493587 HLA-DQA1Q5Y7H0 255 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 Q6ZS52 159 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 SFTPA2Q8IWL1 248 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 OR1L1Q8NH94 360 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 DNAJC30Q96LL9 226 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 SLC25A33Q9BSK2 321 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 C1orf43Q9BWL3 253 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 FBXL15Q9H469 300 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 LYRM4Q9HD34 91 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 IL36RNQ9UBH0 155 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 KLF12Q9Y4X4 402 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF318Q5VUA4 2279 aa5.66□□□□□ -1.5
VPS13B-205ENST00000493587 PRSS38A1L453 326 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 MRPS21P82921 87 aaKnown RBP5.65□□□□□ -1.5
VPS13B-205ENST00000493587 CBLN3Q6UW01 205 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 ASCL2Q99929 193 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 TXNIPQ9H3M7 391 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 OSTCQ9NRP0 149 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 PIGLQ9Y2B2 252 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 TANC2Q9HCD6 1990 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 C21orf140B9A014 251 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 C9JAW5 83 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 J3KT08 172 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 CRXO43186 299 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-205ENST00000493587 DNPH1O43598 174 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 ACTL6BO94805 426 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 CACNG7P62955 275 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 POU2AF1Q16633 256 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 PIGYQ3MUY2 71 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 C9orf153Q5TBE3 101 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 Q6ZRM9 215 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 OSR2Q8N2R0 312 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 CHCHD1Q96BP2 118 aaKnown RBP5.65□□□□□ -1.5
VPS13B-205ENST00000493587 EMC6Q9BV81 110 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 HIGD1AQ9Y241 93 aa5.65□□□□□ -1.5
VPS13B-205ENST00000493587 FREM2Q5SZK8 3169 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 PIGBOS1A0A0B4J2F0 54 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 IGKV1-9A0A0C4DH69 117 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 KIR2DS1A0A191URI9 304 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 RHODO00212 210 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 IGKV1D-16P01601 117 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 ZNF688P0C7X2 276 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 IGLV3-21P80748 117 aaPredicted RBP5.65□□□□□ -1.51
VPS13B-205ENST00000493587 KIR2DS1Q14954 304 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 RHBDD2Q6NTF9 364 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 SSMEM1Q8WWF3 244 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 AP5S1Q9NUS5 200 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 NCKAP5O14513 1909 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 CABIN1Q9Y6J0 2220 aa5.65□□□□□ -1.51
VPS13B-205ENST00000493587 KLK10O43240 276 aa5.64□□□□□ -1.51
VPS13B-205ENST00000493587 P04436 131 aa5.64□□□□□ -1.51
VPS13B-205ENST00000493587 FNDC7Q5VTL7 733 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms