RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ZNF257Q9Y2Q1 563 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 OVOL1O14753 267 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 RAMP3O60896 148 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 PPBPP02775 128 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 RNF126Q9BV68 326 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 RPUSD1Q9UJJ7 312 aaKnown RBP13.54□□□□□ -0.24
BRAT1-206ENST00000493232 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 OOSP1A8MZH6 123 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 J3QRE1 110 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 EFNA4P52798 201 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 OR5AN1Q8NGI8 311 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 PSG8Q9UQ74 426 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 TMEM42Q69YG0 159 aa13.54□□□□□ -0.24
BRAT1-206ENST00000493232 RALGAPA2Q2PPJ7 1873 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 GNG5P63218 68 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 PAX8Q06710 450 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 GGNQ86UU5 652 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 ZNF672Q499Z4 452 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-206ENST00000493232 C20orf204Q6ZNR8 217 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 NR2C2APQ86WQ0 139 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 C17orf82Q86X59 251 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-206ENST00000493232 VCX2Q9H322 139 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 TRAV40A0A0B4J280 105 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 STAG3L3P0CL85 134 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 CTAG1AP78358 180 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 ZCCHC24Q8N2G6 241 aaKnown RBP13.53□□□□□ -0.24
BRAT1-206ENST00000493232 ZNF319Q9P2F9 582 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 NUDT10Q8NFP7 164 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 PRDM13Q9H4Q3 707 aa13.53□□□□□ -0.24
BRAT1-206ENST00000493232 RNF5Q99942 180 aa13.52□□□□□ -0.24
BRAT1-206ENST00000493232 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 LY6DQ14210 128 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 MTURNQ8N3F0 131 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 PAQR4Q8N4S7 273 aaPredicted RBP13.52□□□□□ -0.25
BRAT1-206ENST00000493232 NXT2Q9NPJ8 142 aaKnown RBP13.52□□□□□ -0.25
BRAT1-206ENST00000493232 CACNA1IQ9P0X4 2223 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 PSME4Q14997 1843 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 SPTBP11277 2137 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 PRR32B1ATL7 298 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 MALP21145 153 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 BTCP35070 178 aa13.52□□□□□ -0.25
BRAT1-206ENST00000493232 FOXF2Q12947 444 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 MINOS1Q5TGZ0 78 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 FGFBP3Q8TAT2 258 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 MINOS1-NBL1R4GNA1 71 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 TSPAN13O95857 204 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 SRSF1Q07955 248 aaKnown RBP eCLIP13.51□□□□□ -0.25
BRAT1-206ENST00000493232 HEPN1Q6WQI6 88 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 CD24P25063 80 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 PIKFYVEQ9Y2I7 2098 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 IGHV2-26A0A0B4J1V2 119 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 LINC01549A6NIU2 74 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 F8VVB4 439 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 F8VWA3 439 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
BRAT1-206ENST00000493232 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 GLMPQ8WWB7 406 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 NABP1Q96AH0 204 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 RNASE7Q9H1E1 156 aaKnown RBP13.5□□□□□ -0.25
BRAT1-206ENST00000493232 CYSLTR1Q9Y271 337 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 F2Z2F3 143 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 EFNB3Q15768 340 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 CD5P06127 495 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 PYYP10082 97 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 PRB3Q04118 309 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-206ENST00000493232 LY6G6FQ5SQ64 297 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 A0A0A6YYD4 124 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 NDUFA3O95167 84 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 TMEM170AQ8WVE7 144 aa13.5□□□□□ -0.25
BRAT1-206ENST00000493232 ZNF318Q5VUA4 2279 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 C14orf144Q96I85 54 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 TRGV4A0A0C4DH28 118 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 HBDP02042 147 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 TFF1P04155 84 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 SIGLEC15Q6ZMC9 328 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 EFNA2O43921 213 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 FBLN7Q53RD9 439 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 CD55P08174 381 aa13.49□□□□□ -0.25
BRAT1-206ENST00000493232 ZDBF2Q9HCK1 2354 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 IGKV1-12A0A0C4DH73 117 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 IGKV1D-12P01611 117 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 IGHV1-8P0DP01 117 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 MBD3L1Q8WWY6 194 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 NUDT11Q96G61 164 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 C1QTNF9P0C862 333 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 MST1P26927 711 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 MBNL3Q9NUK0 354 aaKnown RBP13.48□□□□□ -0.25
BRAT1-206ENST00000493232 SLC25A15Q9Y619 301 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 TMEM178BH3BS89 294 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 C10orf126Q8N4M7 172 aa13.48□□□□□ -0.25
BRAT1-206ENST00000493232 TPTE2P1Q5T6R2 138 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 FAM19A2Q8N3H0 131 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms