RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 FHITP49789 147 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-213ENST00000492506 TAS2R30P59541 319 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 BSXQ3C1V8 233 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 MINOS1Q5TGZ0 78 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 OR4C5Q8NGB2 326 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 OR4X2Q8NGF9 303 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 DPF1Q92782 380 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 PINX1Q96BK5 328 aaKnown RBP10.4□□□□□ -0.74
HDAC3-213ENST00000492506 PSMG3Q9BT73 122 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-213ENST00000492506 TMEM59Q9BXS4 323 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 LPAR5Q9H1C0 372 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 SLC2A9Q9NRM0 540 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 MRPS16Q9Y3D3 137 aaKnown RBP10.4□□□□□ -0.74
HDAC3-213ENST00000492506 LSM4Q9Y4Z0 139 aaKnown RBP10.4□□□□□ -0.74
HDAC3-213ENST00000492506 COX11Q9Y6N1 276 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 MINOS1-NBL1R4GNA1 71 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 KIAA2026Q5HYC2 2103 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 SRSF10O75494 262 aaKnown RBP10.39□□□□□ -0.75
HDAC3-213ENST00000492506 KBTBD11O94819 623 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 IFNA5P01569 189 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 OR5G3P0C626 314 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 THBS3P49746 956 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 UCP3P55916 312 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 TMEM187Q14656 261 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 C16orf82Q7Z2V1 217 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-213ENST00000492506 CIB3Q96Q77 187 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-213ENST00000492506 RNF2Q99496 336 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 VPS25Q9BRG1 176 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 PARD6GQ9BYG4 376 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-213ENST00000492506 CSTL1Q9H114 145 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 SLC22A13Q9Y226 551 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 ST3GAL6Q9Y274 331 aa10.39□□□□□ -0.75
HDAC3-213ENST00000492506 RCL1Q9Y2P8 373 aaKnown RBP10.39□□□□□ -0.75
HDAC3-213ENST00000492506 SH2D7A6NKC9 451 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-213ENST00000492506 YPEL1O60688 119 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF737O75373 536 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 IGLV3-1P01715 115 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 CD24P25063 80 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 SNU13P55769 128 aaKnown RBP10.38□□□□□ -0.75
HDAC3-213ENST00000492506 ABCA11PQ4W5N1 156 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 KHDC1LQ5JSQ8 128 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 OR4D5Q8NGN0 318 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 YPEL2Q96QA6 119 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 ATP5SQ99766 215 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 HSF4Q9ULV5 492 aa10.38□□□□□ -0.75
HDAC3-213ENST00000492506 IGHV2-26A0A0B4J1V2 119 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 TMEM238C9JI98 176 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 J3QT63 122 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 REG1AP05451 166 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF20P17024 532 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF93P35789 620 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-213ENST00000492506 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
HDAC3-213ENST00000492506 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 CCL20P78556 96 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 SERF2P84101 59 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 PRSS8Q16651 343 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 COX19Q49B96 90 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 TPTE2P1Q5T6R2 138 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 PLCXD3Q63HM9 321 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 C18orf65Q6ZTR6 163 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 COMMD2Q86X83 199 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 BATF2Q8N1L9 274 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 FAM89BQ8N5H3 189 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 TCTEX1D1Q8N7M0 179 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 OR4P4Q8NGL7 312 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 MCRIP2Q9BUT9 160 aaKnown RBP10.37□□□□□ -0.75
HDAC3-213ENST00000492506 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
HDAC3-213ENST00000492506 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
HDAC3-213ENST00000492506 MRPS28Q9Y2Q9 187 aaKnown RBP10.37□□□□□ -0.75
HDAC3-213ENST00000492506 CCL25O15444 150 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 SCGB1A1P11684 91 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 SUMO1P63165 101 aaKnown RBP10.36□□□□□ -0.75
HDAC3-213ENST00000492506 TCF24Q7RTU0 167 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 OSR2Q8N2R0 312 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 SLC25A33Q9BSK2 321 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 MANBALQ9NQG1 85 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 SLC35D1Q9NTN3 355 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 FAM206AQ9NX38 181 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 GNG13Q9P2W3 67 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 LAMTOR2Q9Y2Q5 125 aa10.36□□□□□ -0.75
HDAC3-213ENST00000492506 HYDINQ4G0P3 5121 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 HTR1DP28221 377 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 EDDM3BP56851 147 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 RHOGP84095 191 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 MEF2CQ06413 473 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-213ENST00000492506 ADIRFQ15847 76 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 BATFQ16520 125 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms