RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 LSM5Q9Y4Y9 91 aaKnown RBP11.75□□□□□ -0.53
CDK11A-220ENST00000492390 MUC4Q99102 2169 aa11.75□□□□□ -0.53
CDK11A-220ENST00000492390 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 ANKRD34BA5PLL1 514 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 HMSDA8MTL9 139 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 UPK2O00526 184 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 RRHO14718 337 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 SNAPC5O75971 98 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 KBTBD11O94819 623 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 NXPH3O95157 252 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 NDUFB8O95169 186 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 TNFRSF9Q07011 255 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 OR4A16Q8NH70 328 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 C11orf1Q9H5F2 150 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 OR5AC2Q9NZP5 309 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
CDK11A-220ENST00000492390 A0A0J9YWU9 116 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 ZNF785A8K8V0 405 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 H3BUA1 57 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 FCN1O00602 326 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 SSSCA1O60232 199 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 RBMXL2O75526 392 aaKnown RBP11.73□□□□□ -0.53
CDK11A-220ENST00000492390 RLN2P04090 185 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 FGF2P09038 288 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 ATF4P18848 351 aaPredicted RBP11.73□□□□□ -0.53
CDK11A-220ENST00000492390 POLR2GP62487 172 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDK11A-220ENST00000492390 PLGLAQ15195 96 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 C9orf62Q8N4C0 152 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 FAM103A1Q9BTL3 118 aaKnown RBP11.73□□□□□ -0.53
CDK11A-220ENST00000492390 QTRT1Q9BXR0 403 aaKnown RBP11.73□□□□□ -0.53
CDK11A-220ENST00000492390 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 WFDC10AQ9H1F0 79 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 TNFSF18Q9UNG2 199 aa11.73□□□□□ -0.53
CDK11A-220ENST00000492390 E5RGE8 158 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 WRBO00258 174 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 ARPC5O15511 151 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 CRYGBP07316 175 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDK11A-220ENST00000492390 PSG5Q15238 335 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 ZNF562Q6V9R5 426 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 WFDC3Q8IUB2 231 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
CDK11A-220ENST00000492390 PEF1Q9UBV8 284 aaKnown RBP11.72□□□□□ -0.53
CDK11A-220ENST00000492390 SYNGR2O43760 224 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 MED6O75586 246 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 PVALBP20472 110 aaPredicted RBP11.71□□□□□ -0.53
CDK11A-220ENST00000492390 SPCS3P61009 180 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
CDK11A-220ENST00000492390 CD300EQ496F6 205 aaPredicted RBP11.71□□□□□ -0.53
CDK11A-220ENST00000492390 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 RBKSQ9H477 322 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.53
CDK11A-220ENST00000492390 ZNF257Q9Y2Q1 563 aa11.71□□□□□ -0.53
CDK11A-220ENST00000492390 RNF222A6NCQ9 220 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 CXCL2P19875 107 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 ZNF345Q14585 488 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 MRGPRG-AS1Q2M3A8 158 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 RPEL1Q2QD12 228 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 ZNF430Q9H8G1 570 aaPredicted RBP11.7□□□□□ -0.54
CDK11A-220ENST00000492390 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 OR51B2Q9Y5P1 312 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
CDK11A-220ENST00000492390 L7N2F9 121 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 TMEM50AO95807 157 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 IFNA17P01571 189 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 P2RY1P47900 373 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 PAX9P55771 341 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
CDK11A-220ENST00000492390 VAMP2P63027 116 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 PRSS8Q16651 343 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 ZNF343Q6P1L6 599 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 MMD2Q8IY49 270 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 INO80EQ8NBZ0 244 aaPredicted RBP11.69□□□□□ -0.54
CDK11A-220ENST00000492390 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 AQP10Q96PS8 301 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 MFFQ9GZY8 342 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
CDK11A-220ENST00000492390 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
CDK11A-220ENST00000492390 MSGN1A6NI15 193 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 CEBPZOSA8MTT3 80 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 IAPPP10997 89 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 MYOD1P15172 320 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 MAS1LP35410 378 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 NUP62P37198 522 aaPredicted RBP11.68□□□□□ -0.54
CDK11A-220ENST00000492390 TAS2R30P59541 319 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 PRCDQ00LT1 54 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 OR2F1Q13607 317 aa11.68□□□□□ -0.54
CDK11A-220ENST00000492390 LGALSLQ3ZCW2 172 aaPredicted RBP11.68□□□□□ -0.54
CDK11A-220ENST00000492390 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms