RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	BATF3	Q9NR55	127 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	SMPX	Q9UHP9	88 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	KLK5	Q9Y337	293 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	IGHV7-4-1	A0A0J9YVY3	117 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	YIF1A	O95070	293 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	CTSG	P08311	255 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	CMC4	P56277	68 aa	Predicted RBP	11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	H2BFWT	Q7Z2G1	175 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	TMEM116	Q8NCL8	245 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	GLYATL2	Q8WU03	294 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	RNF2	Q99496	336 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	TXN2	Q99757	166 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	RHPN1-AS1	Q9BWJ2	59 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	TMEM222	Q9H0R3	208 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170	MAP6D1	Q9H9H5	199 aa		11.34	□□□□□ -0.59
MRPL55-231	ENST00000492170		I3L2K1	104 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	CHEK1	O14757	476 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	CDS2	O95674	445 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	IGKV1-5	P01602	117 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	OR5AC1	P0C628	307 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	IL7	P13232	177 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	FCGR2B	P31994	310 aa	Predicted RBP	11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	PRCD	Q00LT1	54 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	SP6	Q3SY56	376 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	TRIQK	Q629K1	86 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	ZNF114	Q8NC26	417 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	OR10C1	Q96KK4	312 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	PTTG2	Q9NZH5	202 aa		11.33	□□□□□ -0.6
MRPL55-231	ENST00000492170	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	GNG7	O60262	68 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	ATG12	O94817	140 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	MT-CO2	P00403	227 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	TFPI2	P48307	235 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	DHODH	Q02127	395 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	APRG1	Q8IVJ8	170 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	LHFPL5	Q8TAF8	219 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	GINS3	Q9BRX5	216 aa		11.32	□□□□□ -0.6
MRPL55-231	ENST00000492170	IGKV3-7	A0A075B6H7	116 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	IGHV3-49	A0A0A0MS15	119 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	TRAV14DV4	A0A0A6YYC5	116 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	NAP1L6	A6NFF2	107 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	HSPE1	P61604	102 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	SUPT4H1	P63272	117 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	ERH	P84090	104 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	TRIM16L	Q309B1	348 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	RBPMS	Q93062	196 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	PINX1	Q96BK5	328 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	ZNF414	Q96IQ9	312 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	C7orf50	Q9BRJ6	194 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	CSTL1	Q9H114	145 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	TMEM56-RWDD3	S4R434	201 aa		11.31	□□□□□ -0.6
MRPL55-231	ENST00000492170	KMT2A	Q03164	3969 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170		A0A0G2JRQ6	117 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	MPTX1	A8MV57	137 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	IGHV3-48	P01763	117 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	CD5	P06127	495 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	BTC	P35070	178 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	INPP1	P49441	399 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	AKR1C2	P52895	323 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	PAFAH1B2	P68402	229 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	TMEM187	Q14656	261 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	RBMS2	Q15434	407 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	AARD	Q4LEZ3	155 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	FAM219A	Q8IW50	185 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	GATAD1	Q8WUU5	269 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	IL22RA2	Q969J5	263 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	CCDC32	Q9BV29	185 aa		11.3	□□□□□ -0.6
MRPL55-231	ENST00000492170	IGHV3OR16-13	A0A075B7E8	117 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	IGHV3-74	A0A0B4J1X5	117 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170		A0A0B4J293	547 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	NDUFB6	O95139	128 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	NPBWR1	P48145	328 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	ZNF124	Q15973	351 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	IZUMO4	Q1ZYL8	232 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	TMEM128	Q5BJH2	165 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	FAM90A2P	Q658T7	463 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	TCF24	Q7RTU0	167 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	SELENOH	Q8IZQ5	122 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	GBGT1	Q8N5D6	347 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	S100Z	Q8WXG8	99 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	KCNIP3	Q9Y2W7	256 aa		11.29	□□□□□ -0.6
MRPL55-231	ENST00000492170	AKR1C4	P17516	323 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	SNCA	P37840	140 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	CCR6	P51684	374 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	TMEM268	Q5VZI3	342 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	TOMM20L	Q6UXN7	152 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	SLC35G3	Q8N808	338 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	DUSP18	Q8NEJ0	188 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	RRNAD1	Q96FB5	475 aa	Known RBP	11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	RARRES2	Q99969	163 aa		11.28	□□□□□ -0.6
MRPL55-231	ENST00000492170	INS-IGF2	F8WCM5	200 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	DNASE2	O00115	360 aa	Predicted RBP	11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	PLA2G10	O15496	165 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	ST8SIA3	O43173	380 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	SRPX	P78539	464 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	SPINK9	Q5DT21	86 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	ZNF600	Q6ZNG1	722 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170		Q6ZRM9	215 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms