RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 C15orf40Q8WUR7 153 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 LSM10Q969L4 123 aaKnown RBP6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 TRIM63Q969Q1 353 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 PPP1R14BQ96C90 147 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 RNF2Q99496 336 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 RARRES2Q99969 163 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRR13Q9NZ81 148 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 MRPL36Q9P0J6 103 aaKnown RBP6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 RYR1P21817 5038 aa6.19□□□□□ -1.42
APOBEC3F-204ENST00000491387 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 IGHV3OR16-13A0A075B7E8 117 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 IGHV3-74A0A0B4J1X5 117 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 LYRM1O43325 122 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 IFNA4P05014 189 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 ERVK-16P61578 105 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 MRPS10P82664 201 aaKnown RBP6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRR20EP86478 221 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRR20CP86479 221 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRR20DP86480 221 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRR20BP86481 221 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRR20AP86496 221 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 RELQ04864 619 aaPredicted RBP6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 RBMS2Q15434 407 aaKnown RBP6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 OR1P1Q8NH06 330 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 LHFPL5Q8TAF8 219 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 ENKURQ8TC29 256 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 MARCH1Q8TCQ1 289 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 C2CD4CQ8TF44 421 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 SMIM4Q8WVI0 70 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 TXN2Q99757 166 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 RHPN1-AS1Q9BWJ2 59 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 HRH4Q9H3N8 390 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 FAM212BQ9NTI7 297 aaPredicted RBP6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 TMEM14BQ9NUH8 114 aa6.18□□□□□ -1.42
APOBEC3F-204ENST00000491387 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 C11orf94C9JXX5 98 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 GABARAPH6UMI1 98 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 I3L2K1 104 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 DFFBO76075 338 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 NXPH3O95157 252 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 APOHP02749 345 aaPredicted RBP6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 P0C879 139 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 PGAM2P15259 253 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 PIGPP57054 158 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 NANOS2P60321 138 aaKnown RBP6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 MLANAQ16655 118 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 Q6ZRM9 215 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 TOMM5Q8N4H5 51 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 ZNF114Q8NC26 417 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 TMEM116Q8NCL8 245 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 OR13C8Q8NGS7 320 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 OR11H2Q8NH07 326 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 MISP3Q96FF7 219 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 C7orf50Q9BRJ6 194 aaKnown RBP6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 C20orf24Q9BUV8 137 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 SCPEP1Q9HB40 452 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 FKBP11Q9NYL4 201 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 MTFP1Q9UDX5 166 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRNDQ9UKY0 176 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 APLNQ9ULZ1 77 aa6.17□□□□□ -1.42
APOBEC3F-204ENST00000491387 MUC4Q99102 2169 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 IGKV3-7A0A075B6H7 116 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 TRAV14DV4A0A0A6YYC5 116 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 FAM240BA0A1B0GVZ2 78 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 CENPXA8MT69 81 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 NUPL2O15504 423 aaKnown RBP6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 ST8SIA3O43173 380 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 SNAPC5O75971 98 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 MT-CO2P00403 227 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 UCP3P55916 312 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 AP3S2P59780 193 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 PRCDQ00LT1 54 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 SCGB2B2Q4G0G5 96 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 Q56UQ5 140 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 RNASE10Q5GAN6 216 aaKnown RBP6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 GSG1LQ6UXU4 331 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 LINC00336Q6ZUF6 198 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 H2BFWTQ7Z2G1 175 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 CMTM1Q8IZ96 169 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 LILRB2Q8N423 598 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 DUSP18Q8NEJ0 188 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 OR4C16Q8NGL9 310 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 PINX1Q96BK5 328 aaKnown RBP6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 TMEM56Q96MV1 263 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 VSIRQ9H7M9 311 aa6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
APOBEC3F-204ENST00000491387 A0A0B4J293 547 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 IGHV3-66A0A0C4DH42 116 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 CD74P04233 296 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 TFPI2P48307 235 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 MFAP4P55083 255 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 RND3P61587 244 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 PAFAH1B2P68402 229 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 KLF9Q13886 244 aaPredicted RBP6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 TMEM187Q14656 261 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 MEF2DQ14814 521 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 TMEM41BQ5BJD5 291 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 FAM24BQ8N5W8 94 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 Q8NAQ8 132 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms