RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CD74P04233 296 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 CD5P06127 495 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 UCP1P25874 307 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 OPRK1P41145 380 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 SUB1P53999 127 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMPD4-220ENST00000491319 DEFB131AP59861 70 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 RPL11P62913 178 aaKnown RBP11.51□□□□□ -0.57
SMPD4-220ENST00000491319 FAAP20Q6NZ36 180 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 TMEM229BQ8NBD8 167 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 TERB2Q8NHR7 220 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 RNASE11Q8TAA1 199 aaKnown RBP11.51□□□□□ -0.57
SMPD4-220ENST00000491319 ZFAND1Q8TCF1 268 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 MARCH1Q8TCQ1 289 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 FRAS1Q86XX4 4008 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 RAB3DO95716 219 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 TAS2R19P59542 299 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 MLANAQ16655 118 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 GPR107Q5VW38 600 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 Q6ZRM9 215 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 RRNAD1Q96FB5 475 aaKnown RBP11.5□□□□□ -0.57
SMPD4-220ENST00000491319 MIXL1Q9H2W2 232 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 C11orf68Q9H3H3 251 aaKnown RBP11.5□□□□□ -0.57
SMPD4-220ENST00000491319 ENY2Q9NPA8 101 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 RABAC1Q9UI14 185 aa11.5□□□□□ -0.57
SMPD4-220ENST00000491319 TRAV2A0A0B4J234 112 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 CLN5O75503 358 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 OR5AC1P0C628 307 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
SMPD4-220ENST00000491319 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 STEAP1BQ6NZ63 245 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
SMPD4-220ENST00000491319 LHFPL5Q8TAF8 219 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 TMEM231Q9H6L2 316 aa11.49□□□□□ -0.57
SMPD4-220ENST00000491319 GABARAPH6UMI1 98 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 DEFB4AO15263 64 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 NPPCP23582 126 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 TIGITQ495A1 244 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 STXBP6Q8NFX7 210 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 METTL26Q96S19 204 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
SMPD4-220ENST00000491319 K7EQG2 157 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 RGS5O15539 181 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 DEDDO75618 318 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 B3GALNT1O75752 331 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 CDS2O95674 445 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 CRYBB3P26998 211 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 RPL5P46777 297 aaKnown RBP11.47□□□□□ -0.57
SMPD4-220ENST00000491319 P2RY1P47900 373 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 SPCS3P61009 180 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 TMEM187Q14656 261 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 AARDQ4LEZ3 155 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 STHQ8IWL8 128 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 C11orf45Q8TAV5 145 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 GLYATL2Q8WU03 294 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 C15orf40Q8WUR7 153 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 RTBDNQ9BSG5 229 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-220ENST00000491319 NAA60Q9H7X0 242 aa11.47□□□□□ -0.57
SMPD4-220ENST00000491319 C14orf166Q9Y224 244 aaKnown RBP11.47□□□□□ -0.57
SMPD4-220ENST00000491319 A0A1W2PS18 150 aa11.46□□□□□ -0.57
SMPD4-220ENST00000491319 RBMS2Q15434 407 aaKnown RBP11.46□□□□□ -0.57
SMPD4-220ENST00000491319 FAM219AQ8IW50 185 aa11.46□□□□□ -0.57
SMPD4-220ENST00000491319 RBPMSQ93062 196 aaKnown RBP11.46□□□□□ -0.57
SMPD4-220ENST00000491319 TMEM230Q96A57 120 aa11.46□□□□□ -0.57
SMPD4-220ENST00000491319 MFFQ9GZY8 342 aa11.46□□□□□ -0.57
SMPD4-220ENST00000491319 CACNG5Q9UF02 275 aa11.46□□□□□ -0.57
SMPD4-220ENST00000491319 TEX13DA0A0J9YY54 714 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 CTDSP2O14595 271 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 SCGB2A1O75556 95 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 NXPH3O95157 252 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 GIG44P09565 113 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 ZNF688P0C7X2 276 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 HTR2BP41595 481 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 RND2P52198 227 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 SSBP1Q04837 148 aaKnown RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 MEF2DQ14814 521 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 SPCS2Q15005 226 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 TRPT1Q86TN4 253 aaKnown RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 SELENOHQ8IZQ5 122 aaKnown RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 OR4C16Q8NGL9 310 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 DCANP1Q8TF63 244 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 SMIM4Q8WVI0 70 aa11.45□□□□□ -0.58
SMPD4-220ENST00000491319 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-220ENST00000491319 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 IGLC1P0CG04 106 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 C4BPBP20851 252 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 MRPS10P82664 201 aaKnown RBP11.44□□□□□ -0.58
SMPD4-220ENST00000491319 TMEM268Q5VZI3 342 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 PRSS54Q6PEW0 395 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 Q8NAQ8 132 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms