RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	UCP1	P25874	307 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	DEFB131A	P59861	70 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	RBMS2	Q15434	407 aa	Known RBP	13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	TRIM16L	Q309B1	348 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	SPINK9	Q5DT21	86 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	FAM219A	Q8IW50	185 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	LILRB2	Q8N423	598 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	OR4X1	Q8NH49	305 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	OR52I2	Q8NH67	350 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	METTL26	Q96S19	204 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	CRYBB3	P26998	211 aa		13.12	□□□□□ -0.31
GGA1-223	ENST00000491295	ETV6	P41212	452 aa		13.12	□□□□□ -0.31
GGA1-223	ENST00000491295	HOXA1	P49639	335 aa	Predicted RBP	13.12	□□□□□ -0.31
GGA1-223	ENST00000491295	STH	Q8IWL8	128 aa		13.12	□□□□□ -0.31
GGA1-223	ENST00000491295	TMEM229B	Q8NBD8	167 aa		13.12	□□□□□ -0.31
GGA1-223	ENST00000491295	GRAMD2B	Q96HH9	432 aa		13.12	□□□□□ -0.31
GGA1-223	ENST00000491295	NARS2	Q96I59	477 aa	Known RBP	13.12	□□□□□ -0.31
GGA1-223	ENST00000491295		A0A1B0GU03	582 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	CD74	P04233	296 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	OPRK1	P41145	380 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	EIF2B2	P49770	351 aa	Known RBP	13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	TAS2R19	P59542	299 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	SPCS3	P61009	180 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	SSBP1	Q04837	148 aa	Known RBP	13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	BSX	Q3C1V8	233 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	AARD	Q4LEZ3	155 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	OR52E5	Q8NH55	327 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	TMEM230	Q96A57	120 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	EXTL2	Q9UBQ6	330 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	CACFD1	Q9UGQ2	172 aa		13.11	□□□□□ -0.31
GGA1-223	ENST00000491295	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	CDS2	O95674	445 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	HTR2B	P41595	481 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	NANOS2	P60321	138 aa	Known RBP	13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	SP6	Q3SY56	376 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	MORN3	Q6PF18	240 aa	Predicted RBP	13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	RNASE11	Q8TAA1	199 aa	Known RBP	13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	C2CD4C	Q8TF44	421 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	ABHD1	Q96SE0	405 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	HRH4	Q9H3N8	390 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	RABAC1	Q9UI14	185 aa		13.1	□□□□□ -0.31
GGA1-223	ENST00000491295	IGHV3-66	A0A0C4DH42	116 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	C11orf94	C9JXX5	98 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295		K7EQG2	157 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	GABARAP	O95166	117 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	RAB3D	O95716	219 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	SPP1	P10451	314 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	PPP5C	P53041	499 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	MRPS10	P82664	201 aa	Known RBP	13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	CTF1	Q16619	201 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	LEMD1	Q68G75	181 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	STEAP1B	Q6NZ63	245 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	OR13C8	Q8NGS7	320 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	TMEM222	Q9H0R3	208 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	FBXL17	Q9UF56	701 aa		13.09	□□□□□ -0.31
GGA1-223	ENST00000491295	GABARAP	H6UMI1	98 aa		13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	P2RY1	P47900	373 aa		13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	AP2S1	P53680	142 aa	Predicted RBP	13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	MEF2D	Q14814	521 aa		13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	SURF2	Q15527	256 aa	Predicted RBP	13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	SCGB2B2	Q4G0G5	96 aa		13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	RNASE12	Q5GAN4	147 aa	Known RBP	13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	C14orf166	Q9Y224	244 aa	Known RBP	13.08	□□□□□ -0.32
GGA1-223	ENST00000491295	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	HELT	A6NFD8	242 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	IGKV1-17	P01599	117 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	SLC25A4	P12235	298 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	DHODH	Q02127	395 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	MLANA	Q16655	118 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	TRPT1	Q86TN4	253 aa	Known RBP	13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	NOXA1	Q86UR1	476 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	RPP25L	Q8N5L8	163 aa	Known RBP	13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	FAM24B	Q8N5W8	94 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	STXBP6	Q8NFX7	210 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	OR4D10	Q8NGI6	311 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	OR1S2	Q8NGQ3	325 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	MARCH1	Q8TCQ1	289 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295		Q8WTZ3	238 aa		13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	RBPMS	Q93062	196 aa	Known RBP	13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	MRPL36	Q9P0J6	103 aa	Known RBP	13.07	□□□□□ -0.32
GGA1-223	ENST00000491295	KMT2A	Q03164	3969 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295		A0A0G2JRQ6	117 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	MIF	P14174	115 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	YPEL3	P61236	119 aa	Predicted RBP	13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	C2orf83	Q53S99	150 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295		Q6ZRM9	215 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	DCANP1	Q8TF63	244 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	GLYATL2	Q8WU03	294 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	HEYL	Q9NQ87	328 aa	Predicted RBP	13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	RABL2B	Q9UNT1	228 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295		U3KQE9	123 aa		13.06	□□□□□ -0.32
GGA1-223	ENST00000491295	OR5AC1	P0C628	307 aa		13.05	□□□□□ -0.32
GGA1-223	ENST00000491295	ETFRF1	Q6IPR1	90 aa		13.05	□□□□□ -0.32
GGA1-223	ENST00000491295	CENPS	Q8N2Z9	138 aa		13.05	□□□□□ -0.32
GGA1-223	ENST00000491295		Q8NAQ8	132 aa		13.05	□□□□□ -0.32
GGA1-223	ENST00000491295	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.05	□□□□□ -0.32

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