RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 KIR3DL3Q8N743 410 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 HARBI1Q96MB7 349 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 TTC28Q96AY4 2481 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 PTPRSQ13332 1948 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 DKK1O94907 266 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 SP5Q6BEB4 398 aaPredicted RBP8.1□□□□□ -1.11
ERCC3-208ENST00000491292 EBLN2Q6P2I7 272 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 PRNTQ86SH4 94 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 RNF138Q8WVD3 245 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 RAB1CQ92928 201 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 SFXN3Q9BWM7 321 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 CALYQ9NYX4 217 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 ATG2AQ2TAZ0 1938 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 APC2O95996 2303 aa8.1□□□□□ -1.11
ERCC3-208ENST00000491292 GGTLC3B5MD39 225 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 ARF6P62330 175 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 PRB3Q04118 309 aaPredicted RBP8.09□□□□□ -1.11
ERCC3-208ENST00000491292 ZNF146Q15072 292 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 Q6ZR03 302 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 Q8NFD4 153 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 CCL13Q99616 98 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 LINC00470Q9BZP3 86 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
ERCC3-208ENST00000491292 NAV3Q8IVL0 2385 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 KMT2EQ8IZD2 1858 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 MORN2Q502X0 79 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 Q5PR19 223 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 OR10X1Q8NGY0 326 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 KLF13Q9Y2Y9 288 aaPredicted RBP8.09□□□□□ -1.11
ERCC3-208ENST00000491292 TRAV9-1A0A075B6T8 112 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 H3BUT2 72 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 C10orf55Q5SWW7 151 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 WDR82Q6UXN9 313 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 ZGRF1Q86YA3 2104 aa8.09□□□□□ -1.11
ERCC3-208ENST00000491292 BRWD1-AS2P59051 145 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 LYZP61626 148 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 VWA1Q6PCB0 445 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 TNFRSF19Q9NS68 423 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 IGHV1-69-2A0A0G2JMI3 117 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 C9JCJ5 164 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 PEX7O00628 323 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 CDX2Q99626 313 aaPredicted RBP8.08□□□□□ -1.12
ERCC3-208ENST00000491292 NPIPB11E5RHQ5 1161 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 OCIAD2Q56VL3 154 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 PRNDQ9UKY0 176 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 REV3LO60673 3130 aa8.08□□□□□ -1.12
ERCC3-208ENST00000491292 SAA2-SAA4A0A096LPE2 208 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 A0A1W2PRE2 83 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 GAGE12BA1L429 117 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 A8MWL6 223 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 RBP4P02753 201 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 SAA2P0DJI9 122 aaPredicted RBP8.07□□□□□ -1.12
ERCC3-208ENST00000491292 AREGP15514 252 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 RBX1P62877 108 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 VWC2Q2TAL6 325 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 CD177Q8N6Q3 437 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 MGST3O14880 152 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 HBBP68871 147 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 GTF2H5Q6ZYL4 71 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 C7orf71A4D174 169 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 HLA-DRB1P01911 266 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 LINC00305Q7Z4B0 112 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 TMEM105Q8N8V8 129 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 ITLN1Q8WWA0 313 aa8.07□□□□□ -1.12
ERCC3-208ENST00000491292 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 TRAV8-1A0A0A6YYK1 113 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 C15orf61A6NNL5 157 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 YPEL1O60688 119 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 IGHV1-2P23083 117 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 ZNF134P52741 427 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 ZNF766Q5HY98 468 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 FAM162BQ5T6X4 162 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 MRPL52Q86TS9 123 aaKnown RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 SRSF12Q8WXF0 261 aaKnown RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 GRAMD2BQ96HH9 432 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 YPEL2Q96QA6 119 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 MRPS16Q9Y3D3 137 aaKnown RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 ITGB1BP1O14713 200 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 SUB1P53999 127 aaKnown RBP eCLIP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 PSG9Q00887 426 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 AARDQ4LEZ3 155 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 BHLHA15Q7RTS1 189 aaPredicted RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 TRAV30A0A087WSZ9 112 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 GOSR1O95249 250 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 APOHP02749 345 aaPredicted RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 CT45A6P0DMU7 189 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 CT45A5P0DMU8 189 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 CT45A7P0DMV0 189 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 GPR183P32249 361 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 VDAC2P45880 294 aaPredicted RBP8.06□□□□□ -1.12
ERCC3-208ENST00000491292 CT45A1Q5HYN5 189 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 CT45A3Q8NHU0 189 aa8.06□□□□□ -1.12
ERCC3-208ENST00000491292 THYN1Q9P016 225 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms