RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 OR10W1Q8NGF6 305 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 SUN5Q8TC36 379 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 C17orf50Q8WW18 174 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 RCC1LQ96I51 464 aaKnown RBP8.19□□□□□ -1.1
HDAC3-210ENST00000490808 TMEM68Q96MH6 324 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 TXNDC17Q9BRA2 123 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 GGTLC1Q9BX51 225 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 THYN1Q9P016 225 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 FAM96BQ9Y3D0 163 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 LSM4Q9Y4Z0 139 aaKnown RBP8.19□□□□□ -1.1
HDAC3-210ENST00000490808 PXMP4Q9Y6I8 212 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 CENPVL3A0A0U1RRI6 287 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 SEC14L6B5MCN3 397 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 INAFM1C9JVW0 142 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 MYOD1P15172 320 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 CNTFRP26992 372 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 SAA4P35542 130 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 TAS2R45P59539 299 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 PRB3Q04118 309 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-210ENST00000490808 WT1-ASQ06250 92 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 GAMTQ14353 236 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 ZNF506Q5JVG8 444 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 FAM120AOSQ5T036 256 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 FAM122CQ6P4D5 195 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 SPSB3Q6PJ21 355 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 LCN15Q6UWW0 184 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 S100A7AQ86SG5 101 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 TMEM170AQ8WVE7 144 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 RITA1Q96K30 269 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 PFDN5Q99471 154 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 MGST2Q99735 147 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 VAX2Q9UIW0 290 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 CARHSP1Q9Y2V2 147 aaKnown RBP8.18□□□□□ -1.1
HDAC3-210ENST00000490808 F11RQ9Y624 299 aaKnown RBP8.18□□□□□ -1.1
HDAC3-210ENST00000490808 COL6A5A8TX70 2615 aa8.18□□□□□ -1.1
HDAC3-210ENST00000490808 IGLC7A0M8Q6 106 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 CXorf1O96002 111 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 FBP1P09467 338 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 SRD5A1P18405 259 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
HDAC3-210ENST00000490808 C10orf91Q5T1B1 145 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 ACSM6Q6P461 480 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 SLC35E3Q7Z769 313 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
HDAC3-210ENST00000490808 Q8N6K4 173 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 SSMEM1Q8WWF3 244 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 MISP3Q96FF7 219 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 MEGF9Q9H1U4 602 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 TMEM231Q9H6L2 316 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 GNG13Q9P2W3 67 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 PITPNC1Q9UKF7 332 aa8.17□□□□□ -1.1
HDAC3-210ENST00000490808 FBN1P35555 2871 aaKnown RBP8.16□□□□□ -1.1
HDAC3-210ENST00000490808 TRAV30A0A087WSZ9 112 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 A0A1B0GV50 99 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 CGB1A6NKQ9 187 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 ZFP92A6NM28 416 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 HIST1H1BP16401 226 aaKnown RBP8.16□□□□□ -1.1
HDAC3-210ENST00000490808 S100A7P31151 101 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 HAGHQ16775 308 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 MRGPRG-AS1Q2M3A8 158 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 SOHLH1Q5JUK2 328 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 LDLRAD2Q5SZI1 272 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 MIC13Q5XKP0 118 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 CYP2G1PQ6ZSU1 146 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 C9orf139Q6ZV77 190 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 STPG3Q8N7X2 389 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 GATAD1Q8WUU5 269 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 ARPC1AQ92747 370 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 ACY3Q96HD9 319 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 MRPL32Q9BYC8 188 aaKnown RBP8.16□□□□□ -1.1
HDAC3-210ENST00000490808 VSIRQ9H7M9 311 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 SLC25A22Q9H936 323 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 SLC45A2Q9UMX9 530 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 RFNGQ9Y644 331 aa8.16□□□□□ -1.1
HDAC3-210ENST00000490808 ELOA3CA0A087WX78 387 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-210ENST00000490808 TRAV40A0A0B4J280 105 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 TCRBV4S1A1TA0A5B7 111 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 NPIPB5A8MRT5 1133 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 TEX22C9J3V5 150 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 E7EUB6 86 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 M0QZK8 103 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 FSHBP01225 129 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 HLA-DRB1P01911 266 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 BCL2P10415 239 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 OR10J1P30954 320 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 PRR20EP86478 221 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 PRR20CP86479 221 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 PRR20DP86480 221 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 PRR20BP86481 221 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 PRR20AP86496 221 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 IQCF2Q8IXL9 164 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms