RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 QRFPP83859 136 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 PSG9Q00887 426 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 ICAM4Q14773 271 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 NOL4LQ96MY1 436 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 SH3BGRL3Q9H299 93 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 A0A0C4DFX4 3053 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 WDR86Q86TI4 376 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 TRBV6-6A0A0A6YYG2 114 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 SEC14L6B5MCN3 397 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 CSN3P07498 182 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 FABP4P15090 132 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 DLX1P56177 255 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNF880Q6PDB4 577 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 MRPL32Q9BYC8 188 aaKnown RBP11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 BEX4Q9NWD9 120 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 DNAH14Q0VDD8 3507 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 CFHR2P36980 270 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 LHFPL1Q86WI0 220 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 RNF5Q99942 180 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 PTPRSQ13332 1948 aa11.79□□□□□ -0.52
ARHGEF39-205ENST00000490638 UBE2E1P51965 193 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 LINC00205P59089 165 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 KLF17Q5JT82 389 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 DUX4L9Q6RFH8 374 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 C3orf56Q8N813 242 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 CYB561D1Q8N8Q1 229 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 NPCDR1Q9BY65 106 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNF586Q9NXT0 402 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 CRYBB3P26998 211 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNF600Q6ZNG1 722 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 MED12LQ86YW9 2145 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 A8MWL6 223 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 LMO1P25800 156 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 LOXP28300 417 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 BATFQ16520 125 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 H3BQ15 152 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 CD55P08174 381 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
ARHGEF39-205ENST00000490638 CEP192Q8TEP8 1941 aa11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 GPX4P36969 197 aaPredicted RBP11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 FHITP49789 147 aa11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 ID3Q02535 119 aa11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 AWAT1Q58HT5 328 aa11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 PSMG3Q9BT73 122 aaPredicted RBP11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNRD1Q9P1U0 126 aa11.77□□□□□ -0.52
ARHGEF39-205ENST00000490638 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 LOC105371267A0A1B0GV96 52 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 CD69Q07108 199 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 TMEM189A5PLL7 270 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 H0YJW9 148 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 TFF3Q07654 80 aa11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 MBNL3Q9NUK0 354 aaKnown RBP11.77□□□□□ -0.53
ARHGEF39-205ENST00000490638 MFAP2P55001 183 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 NRGNQ92686 78 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 PRRC2AP48634 2157 aaKnown RBP11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGHV2-70DA0A0C4DH43 119 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 LINC00473A8K010 186 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 GCHFRP30047 84 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 FN1P02751 2386 aaKnown RBP11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 BTCP35070 178 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 OR52E5Q8NH55 327 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 RCC1LQ96I51 464 aaKnown RBP11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
ARHGEF39-205ENST00000490638 C7orf77A4D0Y5 90 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 RNF125Q96EQ8 232 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 C18orf12Q96KH6 178 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 VCANP13611 3396 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 WDR73Q6P4I2 378 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 DSCAMO60469 2012 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 MTORP42345 2549 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 TRAV14DV4A0A0A6YYC5 116 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 NMBP08949 121 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 PMCHP20382 165 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 ERVK11-1P61568 191 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 PAX8Q06710 450 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
ARHGEF39-205ENST00000490638 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 OR1P1Q8NH06 330 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 409.9 ms