RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 RPA2P15927 270 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 F2RP25116 425 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 FCGR2BP31994 310 aaPredicted RBP4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 CBX5P45973 191 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 ARPC4P59998 168 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 CATR1Q13166 79 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 DEFB135Q30KP9 77 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 LGALS9CQ6DKI2 356 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 LAMTOR1Q6IAA8 161 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 SLC25A24Q6NUK1 477 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 RPP25LQ8N5L8 163 aaKnown RBP4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 OR1L8Q8NGR8 309 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 OR51H1Q8NH63 302 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 FCAMRQ8WWV6 532 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 FCGR1BQ92637 280 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 GALNT14Q96FL9 552 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 VCX3BQ9H321 246 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM14BQ9NUH8 114 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 C21orf62Q9NYP8 219 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 UBQLN2Q9UHD9 624 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 SSR3Q9UNL2 185 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 KLK5Q9Y337 293 aaPredicted RBP4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 OR4C46A6NHA9 309 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 I3L2K1 104 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 CYB5BO43169 146 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 XRCC3O43542 346 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 CTSDP07339 412 aaPredicted RBP4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 PSMB9P28065 219 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 LPAR6P43657 344 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 FXYD4P59646 89 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 AADACL3Q5VUY0 350 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 DMBX1Q8NFW5 382 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 OR1P1Q8NH06 330 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 OR5B3Q8NH48 314 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 GATAD1Q8WUU5 269 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 PHLDA1Q8WV24 401 aaPredicted RBP4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 BORCS5Q969J3 196 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 LSM10Q969L4 123 aaKnown RBP4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 MOB3AQ96BX8 217 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 DGCR14Q96DF8 476 aaKnown RBP4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 RNF2Q99496 336 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 CSTL1Q9H114 145 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 DIABLOQ9NR28 239 aa4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 FAM212BQ9NTI7 297 aaPredicted RBP4.64□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV3OR16-8A0A075B7F1 116 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV3-21A0A0B4J1V1 117 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV7-4-1A0A0J9YVY3 117 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 ZNF207O43670 478 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 KRASP01116 189 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 IGKV1-39P01597 117 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 IGKV1D-39P04432 117 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 FCER2P06734 321 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 RPL35AP18077 110 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 G6PCP35575 357 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 CMC4P56277 68 aaPredicted RBP4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 ERVK-16P61578 105 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 MXD1Q05195 221 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 IDNKQ5T6J7 187 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 PVRIGQ6DKI7 326 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM17Q86X19 198 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 APRG1Q8IVJ8 170 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM116Q8NCL8 245 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 SEC22AQ96IW7 307 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 TXN2Q99757 166 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 ZNF2Q9BSG1 426 aaPredicted RBP4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 RHPN1-AS1Q9BWJ2 59 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 NXF2Q9GZY0 626 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 C11orf68Q9H3H3 251 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 VSIRQ9H7M9 311 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 PRNDQ9UKY0 176 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 NSG2Q9Y328 171 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 OR51B2Q9Y5P1 312 aa4.63□□□□□ -1.67
PRPF40A-210ENST00000489741 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 TRAV14DV4A0A0A6YYC5 116 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 MEIS3P1A6NDR6 274 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 C15orf61A6NNL5 157 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 MPTX1A8MV57 137 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 DEDDO75618 318 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 SNAPC5O75971 98 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 PMP2P02689 132 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 RLN1P04808 185 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 GIG44P09565 113 aaPredicted RBP4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 AMTP48728 403 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 MFAP4P55083 255 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 HERV-K104P61576 105 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 RPL36AP83881 106 aaKnown RBP4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 RELQ04864 619 aaPredicted RBP4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 ZNF114Q8NC26 417 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 TMED6Q8WW62 240 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM18Q96B42 140 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM56Q96MV1 263 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 TSC22D3Q99576 134 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 RARRES2Q99969 163 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 C20orf24Q9BUV8 137 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 FKBP11Q9NYL4 201 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 EHFQ9NZC4 300 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
PRPF40A-210ENST00000489741 TRAV2A0A0B4J234 112 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms