RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PINX1Q96BK5 328 aaKnown RBP8.45□□□□□ -1.06
CPSF7-212ENST00000489728 MARVELD1Q9BSK0 173 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 UFC1Q9Y3C8 167 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 S4R3C0 116 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 TRAV30A0A087WSZ9 112 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 SNRPGP15A8MWD9 76 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 PTTG1O95997 202 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 IFNA10P01566 189 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 CSN3P07498 182 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 CTSGP08311 255 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 C12orf45Q8N5I9 185 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-212ENST00000489728 UBAC2Q8NBM4 344 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 TMEM116Q8NCL8 245 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 OR52B4Q8NGK2 314 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 TMEM190Q8WZ59 177 aa8.44□□□□□ -1.06
CPSF7-212ENST00000489728 AURKAIP1Q9NWT8 199 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-212ENST00000489728 TECRQ9NZ01 308 aaKnown RBP8.44□□□□□ -1.06
CPSF7-212ENST00000489728 C2orf70A6NJV1 201 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 C15orf62A8K5M9 175 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 K7EMT4 169 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 CLN5O75503 358 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 NXPH3O95157 252 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 ADMP35318 185 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 NKX2-1P43699 371 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-212ENST00000489728 TAS2R30P59541 319 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 KRTAP10-11P60412 298 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 RAB11AP62491 216 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 IAH1Q2TAA2 248 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-212ENST00000489728 LCN12Q6JVE5 192 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 ZBTB8BQ8NAP8 495 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-212ENST00000489728 TMEM170AQ8WVE7 144 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 CACNG8Q8WXS5 425 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 CHRDL1Q9BU40 450 aa8.43□□□□□ -1.06
CPSF7-212ENST00000489728 FNDC4Q9H6D8 234 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-212ENST00000489728 DAZ1Q9NQZ3 744 aaKnown RBP8.43□□□□□ -1.06
CPSF7-212ENST00000489728 ZNF256Q9Y2P7 627 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-212ENST00000489728 IGHV3-21A0A0B4J1V1 117 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 TMEM213A2RRL7 107 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 MPTX1A8MV57 137 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 INMT-MINDY4F8WBC2 141 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 WRBO00258 174 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 TMEM50AO95807 157 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 C8orf88P0DMB2 117 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 GPX4P36969 197 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-212ENST00000489728 OR10C1Q96KK4 312 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 RAB40CQ96S21 281 aa8.42□□□□□ -1.06
CPSF7-212ENST00000489728 MRPL27Q9P0M9 148 aaKnown RBP8.42□□□□□ -1.06
CPSF7-212ENST00000489728 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 SCAF4O95104 1147 aaKnown RBP8.41□□□□□ -1.06
CPSF7-212ENST00000489728 IFNA4P05014 189 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 FOLR2P14207 255 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 CBLN1P23435 193 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 CD69Q07108 199 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 PRSS54Q6PEW0 395 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 UNQ9165/PRO28630Q6UXU0 137 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 ZNF600Q6ZNG1 722 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 SLC16A13Q7RTY0 426 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 OR1S2Q8NGQ3 325 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 GINS3Q9BRX5 216 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 ZC4H2Q9NQZ6 224 aa8.41□□□□□ -1.06
CPSF7-212ENST00000489728 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
CPSF7-212ENST00000489728 TRAV25A0A0B4J276 109 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 TSC22D2O75157 780 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 IGLC1P0CG04 106 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 IAPPP10997 89 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 SPNP16150 400 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 BMI1P35226 326 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 RND2P52198 227 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-212ENST00000489728 POLR2GP62487 172 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPSF7-212ENST00000489728 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 ADAMTSL5Q6ZMM2 481 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 SLC35E1Q96K37 410 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 C2orf50Q96LR7 162 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 MAGT1Q9H0U3 335 aa8.4□□□□□ -1.06
CPSF7-212ENST00000489728 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.07
CPSF7-212ENST00000489728 C7orf66A4D0T2 115 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 C5orf51A6NDU8 294 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 FNDC10F2Z333 226 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 K7EIL1 84 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 SSSCA1O60232 199 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 IGKV1-17P01599 117 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 CD5P06127 495 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 FABP1P07148 127 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 GP9P14770 177 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 OR10J1P30954 320 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 C11orf87Q6NUJ2 197 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 UXS1Q8NBZ7 420 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 MRAPQ8TCY5 172 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 MRPL36Q9P0J6 103 aaKnown RBP8.39□□□□□ -1.07
CPSF7-212ENST00000489728 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
CPSF7-212ENST00000489728 RCL1Q9Y2P8 373 aaKnown RBP8.39□□□□□ -1.07
CPSF7-212ENST00000489728 IGHV3-35A0A0C4DH35 117 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 WI2-2373I1.2A0A1W2PRP0 233 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms