RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 GPR61Q9BZJ8 451 aa11□□□□□ -0.65
HLA-F-229ENST00000489502 RCL1Q9Y2P8 373 aaKnown RBP11□□□□□ -0.65
HLA-F-229ENST00000489502 SNRPGP15A8MWD9 76 aa10.99□□□□□ -0.65
HLA-F-229ENST00000489502 GOSR2O14653 212 aa10.99□□□□□ -0.65
HLA-F-229ENST00000489502 ID3Q02535 119 aa10.99□□□□□ -0.65
HLA-F-229ENST00000489502 KPRPQ5T749 579 aaPredicted RBP10.99□□□□□ -0.65
HLA-F-229ENST00000489502 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
HLA-F-229ENST00000489502 RNASEH2CQ8TDP1 164 aaKnown RBP10.99□□□□□ -0.65
HLA-F-229ENST00000489502 CIB3Q96Q77 187 aaPredicted RBP10.99□□□□□ -0.65
HLA-F-229ENST00000489502 U3KQ87 197 aa10.99□□□□□ -0.65
HLA-F-229ENST00000489502 IGHV3OR16-8A0A075B7F1 116 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 RPS10-NUDT3A0A1W2PQS6 291 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 ZNF320A2RRD8 509 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 GNG7O60262 68 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 SIX6O95475 246 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 TMEM50AO95807 157 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 MBPP02686 304 aaPredicted RBP10.98□□□□□ -0.65
HLA-F-229ENST00000489502 IFNA4P05014 189 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
HLA-F-229ENST00000489502 RND2P52198 227 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 KRTAP10-11P60412 298 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 TATDN3Q17R31 274 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 SPSB3Q6PJ21 355 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 IL34Q6ZMJ4 242 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 SLC16A13Q7RTY0 426 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 CACNG8Q8WXS5 425 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 ZNF414Q96IQ9 312 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 ELOVL1Q9BW60 279 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
HLA-F-229ENST00000489502 TMEM213A2RRL7 107 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 C7orf66A4D0T2 115 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 NUPL2O15504 423 aaKnown RBP10.97□□□□□ -0.65
HLA-F-229ENST00000489502 WIPF1O43516 503 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 SSNA1O43805 119 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 CSN3P07498 182 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 CTSGP08311 255 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 NPBWR1P48145 328 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 DEFA6Q01524 100 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 SPANXN5Q5MJ07 72 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 PRSS54Q6PEW0 395 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 GSG1LQ6UXU4 331 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 NOXA1Q86UR1 476 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 GPHB5Q86YW7 130 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 TMEM190Q8WZ59 177 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 ACY3Q96HD9 319 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 C2orf50Q96LR7 162 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 ATP6V0BQ99437 205 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 TXN2Q99757 166 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 LSM5Q9Y4Y9 91 aaKnown RBP10.97□□□□□ -0.65
HLA-F-229ENST00000489502 ALG5Q9Y673 324 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 SELENOKQ9Y6D0 94 aa10.97□□□□□ -0.65
HLA-F-229ENST00000489502 A8MWP6 167 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 LGALS9O00182 355 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 S100A10P60903 97 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 RAB11AP62491 216 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 CD69Q07108 199 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 RGS21Q2M5E4 152 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 TM4SF20Q53R12 229 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 ADAMTSL5Q6ZMM2 481 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 OR4X1Q8NH49 305 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 ZNF436Q9C0F3 470 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-229ENST00000489502 GAR1Q9NY12 217 aaKnown RBP10.96□□□□□ -0.65
HLA-F-229ENST00000489502 PSENENQ9NZ42 101 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 PEMTQ9UBM1 199 aa10.96□□□□□ -0.65
HLA-F-229ENST00000489502 STRAPQ9Y3F4 350 aaKnown RBP10.96□□□□□ -0.65
HLA-F-229ENST00000489502 C2orf70A6NJV1 201 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 K7EPK0 472 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 ZNF207O43670 478 aaKnown RBP10.95□□□□□ -0.66
HLA-F-229ENST00000489502 CLN5O75503 358 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 CCNKO75909 580 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 SLC25A4P12235 298 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 INSL3P51460 131 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 PAX9P55771 341 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 TIGITQ495A1 244 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 AURKAIP1Q9NWT8 199 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-229ENST00000489502 MGAT4CQ9UBM8 478 aa10.95□□□□□ -0.66
HLA-F-229ENST00000489502 SORL1Q92673 2214 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 PRSS46E5RG02 174 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 NDUFA4O00483 81 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 IGLC1P0CG04 106 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-229ENST00000489502 RPP30P78346 268 aaKnown RBP10.94□□□□□ -0.66
HLA-F-229ENST00000489502 RELQ04864 619 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-229ENST00000489502 RAB32Q13637 225 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 ETFRF1Q6IPR1 90 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 DYNLRB2Q8TF09 96 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 WDR89Q96FK6 387 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-229ENST00000489502 SLC35E1Q96K37 410 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 PRR25Q96S07 402 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 RAB40CQ96S21 281 aa10.94□□□□□ -0.66
HLA-F-229ENST00000489502 L7N2F9 121 aa10.93□□□□□ -0.66
HLA-F-229ENST00000489502 YIF1AO95070 293 aa10.93□□□□□ -0.66
HLA-F-229ENST00000489502 LY86O95711 162 aa10.93□□□□□ -0.66
HLA-F-229ENST00000489502 IGKV1-17P01599 117 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms