RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OPRK1P41145 380 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 RPL5P46777 297 aaKnown RBP17.04■□□□□ 0.32
COL9A3-213ENST00000489045 TFPI2P48307 235 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 DHODHQ02127 395 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 DEFB135Q30KP9 77 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 AARDQ4LEZ3 155 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 SLIRPQ9GZT3 109 aaKnown RBP17.04■□□□□ 0.32
COL9A3-213ENST00000489045 FNDC4Q9H6D8 234 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-213ENST00000489045 ZFAND3Q9H8U3 227 aa17.04■□□□□ 0.32
COL9A3-213ENST00000489045 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-213ENST00000489045 MRPL36Q9P0J6 103 aaKnown RBP17.04■□□□□ 0.32
COL9A3-213ENST00000489045 RPL35AP18077 110 aaKnown RBP17.03■□□□□ 0.32
COL9A3-213ENST00000489045 SPCS3P61009 180 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 BSXQ3C1V8 233 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 TMEM268Q5VZI3 342 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 FAM90A2PQ658T7 463 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 APRG1Q8IVJ8 170 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 ST8SIA2Q92186 375 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 CACNG5Q9UF02 275 aa17.03■□□□□ 0.32
COL9A3-213ENST00000489045 RSL24D1Q9UHA3 163 aaKnown RBP17.03■□□□□ 0.32
COL9A3-213ENST00000489045 APOHP02749 345 aaPredicted RBP17.02■□□□□ 0.32
COL9A3-213ENST00000489045 BMI1P35226 326 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 Q6ZWC4 215 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 TCF24Q7RTU0 167 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 GBGT1Q8N5D6 347 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 OR52E5Q8NH55 327 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 GPR146Q96CH1 333 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 GALNT14Q96FL9 552 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 TP53TG1Q9Y2A0 90 aa17.02■□□□□ 0.32
COL9A3-213ENST00000489045 KIR2DL5BA0A0G2JN68 375 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 KIR2DL5BA0A0G2JPC4 375 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 A0A1B0GU03 582 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 UBE2CO00762 179 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 SPRY2O43597 315 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 CLN5O75503 358 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 ZNF124Q15973 351 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 MLANAQ16655 118 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 WFDC3Q8IUB2 231 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 KIR2DL5AQ8N109 375 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 STPG3Q8N7X2 389 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 KIR2DL5BQ8NHK3 375 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 VSIRQ9H7M9 311 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 DNAH1Q9P2D7 4330 aa17.01■□□□□ 0.31
COL9A3-213ENST00000489045 IGHV3-66A0A0C4DH42 116 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 TNFSF8P32971 234 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 HTR2BP41595 481 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 LILRB2Q8N423 598 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 OR4X1Q8NH49 305 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 MCFD2Q8NI22 146 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 TMEM230Q96A57 120 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 SOSTQ9BQB4 213 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 MAP6D1Q9H9H5 199 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 HEYLQ9NQ87 328 aaPredicted RBP17■□□□□ 0.31
COL9A3-213ENST00000489045 SCP2D1Q9UJQ7 156 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 TMEM56-RWDD3S4R434 201 aa17■□□□□ 0.31
COL9A3-213ENST00000489045 FABP12A6NFH5 140 aa16.99■□□□□ 0.31
COL9A3-213ENST00000489045 CMC4P56277 68 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-213ENST00000489045 MCUBQ9NWR8 336 aa16.99■□□□□ 0.31
COL9A3-213ENST00000489045 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
COL9A3-213ENST00000489045 A0A0J9YWU9 116 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 CEBPZOSA8MTT3 80 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 DFFBO76075 338 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 CD5P06127 495 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 PAFAH1B2P68402 229 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 TMEM187Q14656 261 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 RNF183Q96D59 192 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 KCNIP3Q9Y2W7 256 aa16.98■□□□□ 0.31
COL9A3-213ENST00000489045 SCGB2A1O75556 95 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 JTBO76095 146 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 NXPH3O95157 252 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 LYG2Q86SG7 212 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 SLC24A4Q8NFF2 622 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 IL22RA2Q969J5 263 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 SCGB3A2Q96PL1 93 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 MS4A6AQ9H2W1 248 aa16.97■□□□□ 0.31
COL9A3-213ENST00000489045 RPS10-NUDT3A0A1W2PQS6 291 aa16.96■□□□□ 0.31
COL9A3-213ENST00000489045 IGKV1-17P01599 117 aa16.96■□□□□ 0.31
COL9A3-213ENST00000489045 TNFRSF9Q07011 255 aa16.96■□□□□ 0.31
COL9A3-213ENST00000489045 TIGITQ495A1 244 aa16.96■□□□□ 0.31
COL9A3-213ENST00000489045 C2orf83Q53S99 150 aa16.96■□□□□ 0.31
COL9A3-213ENST00000489045 TMEM231Q9H6L2 316 aa16.96■□□□□ 0.31
COL9A3-213ENST00000489045 DNASE2O00115 360 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-213ENST00000489045 SULT1A3P0DMM9 295 aa16.95■□□□□ 0.3
COL9A3-213ENST00000489045 SULT1A4P0DMN0 295 aa16.95■□□□□ 0.3
COL9A3-213ENST00000489045 AKR1C4P17516 323 aa16.95■□□□□ 0.3
COL9A3-213ENST00000489045 NPPCP23582 126 aa16.95■□□□□ 0.3
COL9A3-213ENST00000489045 RPL11P62913 178 aaKnown RBP16.95■□□□□ 0.3
COL9A3-213ENST00000489045 SUPT4H1P63272 117 aaKnown RBP16.95■□□□□ 0.3
COL9A3-213ENST00000489045 EWSR1Q01844 656 aaKnown RBP eCLIP16.95■□□□□ 0.3
COL9A3-213ENST00000489045 RNASEH2CQ8TDP1 164 aaKnown RBP16.95■□□□□ 0.3
COL9A3-213ENST00000489045 METTL26Q96S19 204 aa16.95■□□□□ 0.3
COL9A3-213ENST00000489045 TRAV30A0A087WSZ9 112 aa16.94■□□□□ 0.3
COL9A3-213ENST00000489045 PRSS54Q6PEW0 395 aa16.94■□□□□ 0.3
COL9A3-213ENST00000489045 TMEM170AQ8WVE7 144 aa16.94■□□□□ 0.3
COL9A3-213ENST00000489045 PLECQ15149 4684 aaKnown RBP16.93■□□□□ 0.3
COL9A3-213ENST00000489045 A0A1W2PS18 150 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 IGLC1P0CG04 106 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 SLC25A4P12235 298 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 NPY1RP25929 384 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 CRYBB3P26998 211 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms