RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TBC1D24Q9ULP9 559 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 LOC102724200A0A096LPH7 203 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 A0A0B4J293 547 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 TEX13DA0A0J9YY54 714 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 OR4C46A6NHA9 309 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 NDUFB6O95139 128 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 OR5AC1P0C628 307 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 NPBWR1P48145 328 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 DHODHQ02127 395 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 IZUMO4Q1ZYL8 232 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 SPINK9Q5DT21 86 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 DUSP18Q8NEJ0 188 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
SPTLC1-207ENST00000488921 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 SCGB2A1O75556 95 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 YIF1AO95070 293 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 CDS2O95674 445 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 BMI1P35226 326 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 TMED4Q7Z7H5 227 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 OR10C1Q96KK4 312 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 RETNQ9HD89 108 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 GPR132Q9UNW8 380 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 KCNIP3Q9Y2W7 256 aa10.32□□□□□ -0.76
SPTLC1-207ENST00000488921 IGHV3OR16-8A0A075B7F1 116 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 IGHV7-4-1A0A0J9YVY3 117 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 CRYM-AS1A6NIL9 109 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 ZNF207O43670 478 aaKnown RBP10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 TCRBP04435 133 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 RGS21Q2M5E4 152 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 CENPSQ8N2Z9 138 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 TMEM116Q8NCL8 245 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 OR52E5Q8NH55 327 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 IL17DQ8TAD2 202 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 GLYATL2Q8WU03 294 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 FAM110AQ9BQ89 295 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 CACFD1Q9UGQ2 172 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 SMPXQ9UHP9 88 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 RYR3Q15413 4870 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 CSMD3Q7Z407 3707 aa10.31□□□□□ -0.76
SPTLC1-207ENST00000488921 TRAV14DV4A0A0A6YYC5 116 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 A0A0G2JRQ6 117 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 PTTG1O95997 202 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 IGHV3-48P01763 117 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 CD5P06127 495 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 H2AFB2P0C5Z0 115 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 AKR1C4P17516 323 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 BTCP35070 178 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 APOC4P55056 127 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 SPCS3P61009 180 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 AARDQ4LEZ3 155 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 ZNF600Q6ZNG1 722 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 NRARPQ7Z6K4 114 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 RHPN1-AS1Q9BWJ2 59 aa10.3□□□□□ -0.76
SPTLC1-207ENST00000488921 CHEK1O14757 476 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 ANXA3P12429 323 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 OPRK1P41145 380 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 HTR2BP41595 481 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 TMEM128Q5BJH2 165 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 TMEM268Q5VZI3 342 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 SELENOHQ8IZQ5 122 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 LHFPL5Q8TAF8 219 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 IL22RA2Q969J5 263 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 GALNT14Q96FL9 552 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 C20orf85Q9H1P6 137 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 NUDT15Q9NV35 164 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 UBQLN2Q9UHD9 624 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 TMEM56-RWDD3S4R434 201 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 STARD9Q9P2P6 4700 aa10.29□□□□□ -0.76
SPTLC1-207ENST00000488921 LYSTQ99698 3801 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 TRAV6A0A075B6T7 132 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 PIGBOS1A0A0B4J2F0 54 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 RPS10-NUDT3A0A1W2PQS6 291 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 CMC4P56277 68 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 UBE2MP61081 183 aaKnown RBP10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 PAFAH1B2P68402 229 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 BSXQ3C1V8 233 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 ODF3L2Q3SX64 289 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 C4orf46Q504U0 113 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 ZNF414Q96IQ9 312 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 RNF2Q99496 336 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 CACNG5Q9UF02 275 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
SPTLC1-207ENST00000488921 UBE2CO00762 179 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 TMEM50AO95807 157 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 VAMP1P23763 118 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 SRPXP78539 464 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 TOMM20LQ6UXN7 152 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 Q6ZRM9 215 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 OR4X1Q8NH49 305 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms