RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 NDUFB6O95139 128 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 NXPH3O95157 252 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 SFT2D2O95562 160 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 IL7P13232 177 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 NPBWR1P48145 328 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 CD81P60033 236 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 SMCO1Q147U7 214 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 C2orf83Q53S99 150 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 TRIQKQ629K1 86 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 LINC00322Q6ZN03 302 aaPredicted RBP11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 NEURL2Q9BR09 285 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 HEYLQ9NQ87 328 aaPredicted RBP11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 CACFD1Q9UGQ2 172 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 LINC00854A0A1B0GVQ3 168 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 DUXBA0A1W2PPF3 345 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 ZNF207O43670 478 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 VAMP1P23763 118 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 CENPSQ8N2Z9 138 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 OR4X1Q8NH49 305 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 TM2D3Q9BRN9 247 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 SMPXQ9UHP9 88 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 FLVCR2Q9UPI3 526 aa11.95□□□□□ -0.5
CTDSP1-209ENST00000488627 A6NHS1 94 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 PLA2G10O15496 165 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 OPRK1P41145 380 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 INPP1P49441 399 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 SLC24A4Q8NFF2 622 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 WFDC10AQ9H1F0 79 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 RBKSQ9H477 322 aa11.94□□□□□ -0.5
CTDSP1-209ENST00000488627 PIGBOS1A0A0B4J2F0 54 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 C9orf170A2RU37 121 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 CHEK1O14757 476 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 TSPAN4O14817 238 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 CLN5O75503 358 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 YIF1AO95070 293 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 SLC25A6P12236 298 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 UBE2MP61081 183 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 HAGHQ16775 308 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 DEFB125Q8N687 156 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 WWC2-AS2Q96NR7 200 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 C7orf50Q9BRJ6 194 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 HIPK2Q9H2X6 1198 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 TUBA4BQ9H853 241 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
CTDSP1-209ENST00000488627 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 OR11H12B2RN74 326 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 NPY1RP25929 384 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 ZNF600Q6ZNG1 722 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 RBPMS2Q6ZRY4 209 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 DTD1Q8TEA8 209 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 RHPN1-AS1Q9BWJ2 59 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 TMED3Q9Y3Q3 217 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 PUS1Q9Y606 427 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 U3KQ87 197 aa11.92□□□□□ -0.5
CTDSP1-209ENST00000488627 TRAV14DV4A0A0A6YYC5 116 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 RPS10-NUDT3A0A1W2PQS6 291 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 CNPY1Q3B7I2 92 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 FAM90A2PQ658T7 463 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 LINC00299Q6ZSB3 139 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 SLC16A13Q7RTY0 426 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 OR52B4Q8NGK2 314 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 RCHY1Q96PM5 261 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 RNF2Q99496 336 aa11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
CTDSP1-209ENST00000488627 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 IGHV3-49A0A0A0MS15 119 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 CENPXA8MT69 81 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 IFNA10P01566 189 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 APOHP02749 345 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 HOXB5P09067 269 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 SLC25A4P12235 298 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 GGNBP1Q5YKI7 109 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 LILRB2Q8N423 598 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 CITED4Q96RK1 184 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 VSIRQ9H7M9 311 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
CTDSP1-209ENST00000488627 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 FAM90A26D6RGX4 464 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 OR4E1P0C645 316 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 RND2P52198 227 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 DHRS2Q13268 280 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 TIGITQ495A1 244 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 NOXA1Q86UR1 476 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms