RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 UBE2CO00762 179 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 CMC4P56277 68 aaPredicted RBP17.14■□□□□ 0.33
CUL4A-209ENST00000488558 SPCS3P61009 180 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 TOMM20LQ6UXN7 152 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 Q6ZRM9 215 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 WFDC3Q8IUB2 231 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 LHFPL5Q8TAF8 219 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 SLIRPQ9GZT3 109 aaKnown RBP17.14■□□□□ 0.33
CUL4A-209ENST00000488558 C6orf62Q9GZU0 229 aaPredicted RBP17.14■□□□□ 0.33
CUL4A-209ENST00000488558 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.14■□□□□ 0.33
CUL4A-209ENST00000488558 FAM90A2PQ658T7 463 aa17.13■□□□□ 0.33
CUL4A-209ENST00000488558 ZFAND3Q9H8U3 227 aa17.13■□□□□ 0.33
CUL4A-209ENST00000488558 H3BMQ9 156 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 SCGB2A1O75556 95 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 TMEM50AO95807 157 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 SELENOHQ8IZQ5 122 aaKnown RBP17.12■□□□□ 0.33
CUL4A-209ENST00000488558 OR51S1Q8NGJ8 323 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 GALNT14Q96FL9 552 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 VSIRQ9H7M9 311 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 CACFD1Q9UGQ2 172 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 TMEM56-RWDD3S4R434 201 aa17.12■□□□□ 0.33
CUL4A-209ENST00000488558 DNAH1Q9P2D7 4330 aa17.11■□□□□ 0.33
CUL4A-209ENST00000488558 HTR2BP41595 481 aa17.11■□□□□ 0.33
CUL4A-209ENST00000488558 OR4X1Q8NH49 305 aa17.11■□□□□ 0.33
CUL4A-209ENST00000488558 IL22RA2Q969J5 263 aa17.11■□□□□ 0.33
CUL4A-209ENST00000488558 SOSTQ9BQB4 213 aa17.11■□□□□ 0.33
CUL4A-209ENST00000488558 FNDC4Q9H6D8 234 aaPredicted RBP17.11■□□□□ 0.33
CUL4A-209ENST00000488558 SCP2D1Q9UJQ7 156 aa17.11■□□□□ 0.33
CUL4A-209ENST00000488558 PUS1Q9Y606 427 aaKnown RBP eCLIP17.11■□□□□ 0.33
CUL4A-209ENST00000488558 IGHV3-49A0A0A0MS15 119 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 CLN5O75503 358 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 OPRK1P41145 380 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 TMEM268Q5VZI3 342 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 STPG3Q8N7X2 389 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 SCGB3A2Q96PL1 93 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 CACNG5Q9UF02 275 aa17.1■□□□□ 0.33
CUL4A-209ENST00000488558 PAFAH1B2P68402 229 aa17.09■□□□□ 0.33
CUL4A-209ENST00000488558 GPR146Q96CH1 333 aa17.09■□□□□ 0.33
CUL4A-209ENST00000488558 TMEM231Q9H6L2 316 aa17.09■□□□□ 0.33
CUL4A-209ENST00000488558 TRAV2A0A0B4J234 112 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 A0A1B0GU03 582 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 RPS10-NUDT3A0A1W2PQS6 291 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 SPRY2O43597 315 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 TNFSF8P32971 234 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 TCF24Q7RTU0 167 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 MCFD2Q8NI22 146 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 ST8SIA2Q92186 375 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 TMEM230Q96A57 120 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 MAP6D1Q9H9H5 199 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 MRPL36Q9P0J6 103 aaKnown RBP17.08■□□□□ 0.32
CUL4A-209ENST00000488558 KCNIP3Q9Y2W7 256 aa17.08■□□□□ 0.32
CUL4A-209ENST00000488558 IGHV3OR16-13A0A075B7E8 117 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 TRAV30A0A087WSZ9 112 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 IGHV3-74A0A0B4J1X5 117 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 FABP12A6NFH5 140 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 TNFRSF9Q07011 255 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 DEFB135Q30KP9 77 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 C2orf83Q53S99 150 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 RNASEH2CQ8TDP1 164 aaKnown RBP17.07■□□□□ 0.32
CUL4A-209ENST00000488558 RNF183Q96D59 192 aa17.07■□□□□ 0.32
CUL4A-209ENST00000488558 HEYLQ9NQ87 328 aaPredicted RBP17.07■□□□□ 0.32
CUL4A-209ENST00000488558 JTBO76095 146 aa17.06■□□□□ 0.32
CUL4A-209ENST00000488558 ATF4P18848 351 aaPredicted RBP17.06■□□□□ 0.32
CUL4A-209ENST00000488558 TMEM187Q14656 261 aa17.06■□□□□ 0.32
CUL4A-209ENST00000488558 APRG1Q8IVJ8 170 aa17.06■□□□□ 0.32
CUL4A-209ENST00000488558 SLC24A4Q8NFF2 622 aa17.06■□□□□ 0.32
CUL4A-209ENST00000488558 IGKV3-7A0A075B6H7 116 aa17.05■□□□□ 0.32
CUL4A-209ENST00000488558 A0A1W2PS18 150 aa17.05■□□□□ 0.32
CUL4A-209ENST00000488558 APOHP02749 345 aaPredicted RBP17.05■□□□□ 0.32
CUL4A-209ENST00000488558 SLC25A4P12235 298 aa17.05■□□□□ 0.32
CUL4A-209ENST00000488558 RPL35AP18077 110 aaKnown RBP17.05■□□□□ 0.32
CUL4A-209ENST00000488558 NPPCP23582 126 aa17.05■□□□□ 0.32
CUL4A-209ENST00000488558 TFPI2P48307 235 aa17.05■□□□□ 0.32
CUL4A-209ENST00000488558 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
CUL4A-209ENST00000488558 CEBPZOSA8MTT3 80 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 DFFBO76075 338 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 IGKV1-17P01599 117 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 SULT1A3P0DMM9 295 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 SULT1A4P0DMN0 295 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 CRYBB3P26998 211 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 NMSQ5H8A3 153 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 LYG2Q86SG7 212 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 LILRB2Q8N423 598 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 GBGT1Q8N5D6 347 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 METTL26Q96S19 204 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 MS4A6AQ9H2W1 248 aa17.04■□□□□ 0.32
CUL4A-209ENST00000488558 A0A0B4J2A0 478 aa17.03■□□□□ 0.32
CUL4A-209ENST00000488558 PIGBOS1A0A0B4J2F0 54 aa17.03■□□□□ 0.32
CUL4A-209ENST00000488558 FAUP35544 74 aaKnown RBP17.03■□□□□ 0.32
CUL4A-209ENST00000488558 SRPXP78539 464 aa17.03■□□□□ 0.32
CUL4A-209ENST00000488558 MLANAQ16655 118 aa17.03■□□□□ 0.32
CUL4A-209ENST00000488558 NOXA1Q86UR1 476 aa17.03■□□□□ 0.32
CUL4A-209ENST00000488558 SHPKQ9UHJ6 478 aa17.03■□□□□ 0.32
CUL4A-209ENST00000488558 A0A0J9YWU9 116 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 IGLC1P0CG04 106 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 ANXA3P12429 323 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 CCR6P51684 374 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 SUPT4H1P63272 117 aaKnown RBP17.02■□□□□ 0.32
CUL4A-209ENST00000488558 ZNF124Q15973 351 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 ETFRF1Q6IPR1 90 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms