RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SMIM6P0DI80 62 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 CD69Q07108 199 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 KRTAP24-1Q3LI83 254 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 FBLN7Q53RD9 439 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 TMEM41BQ5BJD5 291 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 LFNGQ8NES3 379 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 PPP1R14DQ9NXH3 145 aa10.1□□□□□ -0.79
NELFE-209ENST00000488426 BTBD17A6NE02 478 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 CNIH1O95406 144 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 AKR1C1Q04828 323 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 RAB31Q13636 194 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 RUSC1-AS1Q66K80 236 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 TEPPQ6URK8 271 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 ATRAIDQ6UW56 229 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 RPRMQ9NS64 109 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 ANK2Q01484 3957 aa10.09□□□□□ -0.79
NELFE-209ENST00000488426 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
NELFE-209ENST00000488426 CORTO00230 105 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 HBE1P02100 147 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 IGHV4-38-2P0DP08 117 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 AREGP15514 252 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 OPRK1P41145 380 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 TMEM144Q7Z5S9 345 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 OR1P1Q8NH06 330 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 MGST2Q99735 147 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 PLXNB1O43157 2135 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 TRAV1-1A0A0B4J248 108 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 REG1AP05451 166 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 ELLP55199 621 aaPredicted RBP10.08□□□□□ -0.8
NELFE-209ENST00000488426 BPIFB3P59826 476 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 RAB2AP61019 212 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 FXYD3Q14802 87 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 FFAR4Q5NUL3 377 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 ACSM6Q6P461 480 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 BRD3OSQ6XYD6 125 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 SLC16A13Q7RTY0 426 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 Q8N9W7 124 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 SSMEM1Q8WWF3 244 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 SLC35E1Q96K37 410 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 GGTLC1Q9BX51 225 aa10.08□□□□□ -0.8
NELFE-209ENST00000488426 F11RQ9Y624 299 aaKnown RBP10.08□□□□□ -0.8
NELFE-209ENST00000488426 A0A0U1RQK1 487 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 FAM74A7A6NL05 159 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 GAMTQ14353 236 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 ACOT6Q3I5F7 207 aaPredicted RBP10.07□□□□□ -0.8
NELFE-209ENST00000488426 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 ABHD5Q8WTS1 349 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 RCC1LQ96I51 464 aaKnown RBP10.07□□□□□ -0.8
NELFE-209ENST00000488426 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 VSIRQ9H7M9 311 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 FAM96BQ9Y3D0 163 aa10.07□□□□□ -0.8
NELFE-209ENST00000488426 AGPAT2O15120 278 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 FBP1P09467 338 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 CX3CL1P78423 397 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 KLF17Q5JT82 389 aaPredicted RBP10.06□□□□□ -0.8
NELFE-209ENST00000488426 SPSB3Q6PJ21 355 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 MBD3L1Q8WWY6 194 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 RPL29P47914 159 aaKnown RBP10.06□□□□□ -0.8
NELFE-209ENST00000488426 OR10G4Q8NGN3 311 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 OR10G9Q8NGN4 311 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 OR10G7Q8NGN6 311 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 SPATA3Q8NHX4 192 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 RASL11BQ9BPW5 248 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 MLXQ9UH92 298 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 PXMP4Q9Y6I8 212 aa10.06□□□□□ -0.8
NELFE-209ENST00000488426 TENM1Q9UKZ4 2725 aa10.05□□□□□ -0.8
NELFE-209ENST00000488426 S100A8P05109 93 aa10.05□□□□□ -0.8
NELFE-209ENST00000488426 CRYGCP07315 174 aa10.05□□□□□ -0.8
NELFE-209ENST00000488426 SRP14P37108 136 aaKnown RBP10.05□□□□□ -0.8
NELFE-209ENST00000488426 MFAP2P55001 183 aa10.05□□□□□ -0.8
NELFE-209ENST00000488426 ZNF726P1Q15940 193 aa10.05□□□□□ -0.8
NELFE-209ENST00000488426 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
NELFE-209ENST00000488426 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
NELFE-209ENST00000488426 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
NELFE-209ENST00000488426 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
NELFE-209ENST00000488426 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 NPIPB5A8MRT5 1133 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 CYB5BO43169 146 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 EIF3GO75821 320 aaKnown RBP eCLIP10.04□□□□□ -0.8
NELFE-209ENST00000488426 APELAP0DMC3 54 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 HNF1AP20823 631 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 S100PP25815 95 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 PIFOQ8TCI5 191 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 MISP3Q96FF7 219 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 SLC39A9Q9NUM3 307 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 SLC45A2Q9UMX9 530 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 IGHV7-81A0A0B4J1V7 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms