RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ADMP35318 185 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 S100A10P60903 97 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-210ENST00000488228 MLANAQ16655 118 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 FAM209BQ5JX69 171 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 SLC16A13Q7RTY0 426 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 HAPLN4Q86UW8 402 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 BSCL2Q96G97 398 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-210ENST00000488228 C2orf50Q96LR7 162 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 CIB3Q96Q77 187 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-210ENST00000488228 LSM5Q9Y4Y9 91 aaKnown RBP8.45□□□□□ -1.06
UBE4B-210ENST00000488228 U3KQ87 197 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 IGHV3OR16-8A0A075B7F1 116 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 K7EPK0 472 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 IFNA4P05014 189 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 RND2P52198 227 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 MFAP4P55083 255 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 H2BFSP57053 126 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 OXA1LQ15070 435 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 UNQ9165/PRO28630Q6UXU0 137 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 RNASEH2CQ8TDP1 164 aaKnown RBP8.44□□□□□ -1.06
UBE4B-210ENST00000488228 WDR89Q96FK6 387 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-210ENST00000488228 ZNF414Q96IQ9 312 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 MGAT4CQ9UBM8 478 aa8.44□□□□□ -1.06
UBE4B-210ENST00000488228 RPS10-NUDT3A0A1W2PQS6 291 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 GNG7O60262 68 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 SAP30O75446 220 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 CCNKO75909 580 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 CTSGP08311 255 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 FCGR2BP31994 310 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-210ENST00000488228 PAX9P55771 341 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 CD69Q07108 199 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 RAB32Q13637 225 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 PRSS54Q6PEW0 395 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 NOXA1Q86UR1 476 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 OR9G4Q8NGQ1 327 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 CACNG8Q8WXS5 425 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 ACY3Q96HD9 319 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 MCRIP2Q9BUT9 160 aaKnown RBP8.43□□□□□ -1.06
UBE4B-210ENST00000488228 PSENENQ9NZ42 101 aa8.43□□□□□ -1.06
UBE4B-210ENST00000488228 STRAPQ9Y3F4 350 aaKnown RBP8.43□□□□□ -1.06
UBE4B-210ENST00000488228 SORL1Q92673 2214 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 ZNF320A2RRD8 509 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 NPBWR1P48145 328 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 RAB11AP62491 216 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 IL15RAQ13261 267 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 LRRC37A5PQ49AS3 106 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 C9orf66Q5T8R8 295 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 SPSB3Q6PJ21 355 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 IL34Q6ZMJ4 242 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 ACOT7LQ6ZUV0 252 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 REC114Q7Z4M0 266 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 OR4X1Q8NH49 305 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 TMEM190Q8WZ59 177 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 SMIM8Q96KF7 97 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 RAB40CQ96S21 281 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 ATP6V0BQ99437 205 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 TXN2Q99757 166 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 C11orf1Q9H5F2 150 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 SELENOKQ9Y6D0 94 aa8.42□□□□□ -1.06
UBE4B-210ENST00000488228 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 A8MWP6 167 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 L7N2F9 121 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 NUPL2O15504 423 aaKnown RBP8.41□□□□□ -1.06
UBE4B-210ENST00000488228 ZNF207O43670 478 aaKnown RBP8.41□□□□□ -1.06
UBE4B-210ENST00000488228 TSC22D2O75157 780 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 CLN5O75503 358 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-210ENST00000488228 METTL15P1P0C7V9 234 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 SLC25A4P12235 298 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 CXCL3P19876 107 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 VAMP2P63027 116 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 RPP30P78346 268 aaKnown RBP8.41□□□□□ -1.06
UBE4B-210ENST00000488228 FCN2Q15485 313 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 TIGITQ495A1 244 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 ADAMTSL5Q6ZMM2 481 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 GPHB5Q86YW7 130 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 C20orf24Q9BUV8 137 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 ZNF436Q9C0F3 470 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-210ENST00000488228 GAR1Q9NY12 217 aaKnown RBP8.41□□□□□ -1.06
UBE4B-210ENST00000488228 PEMTQ9UBM1 199 aa8.41□□□□□ -1.06
UBE4B-210ENST00000488228 C2orf70A6NJV1 201 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 LGALS9O00182 355 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 LY86O95711 162 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 IGKV1-17P01599 117 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 CSN3P07498 182 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 IGLC1P0CG04 106 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 OR10J1P30954 320 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 CAV2P51636 162 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 ATP5IP56385 69 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-210ENST00000488228 KRTAP10-11P60412 298 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 RELQ04864 619 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-210ENST00000488228 FAM106AQ4KMX7 169 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 TM4SF20Q53R12 229 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms