RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 DCTN5Q9BTE1 182 aa11.17□□□□□ -0.62
COPS7B-221ENST00000488111 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 SLC17A3O00476 420 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 GCSAMLQ5JQS6 135 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 NIT1Q86X76 327 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 SLC35D1Q9NTN3 355 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 CDC42EP3Q9UKI2 254 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 WDR83OSQ9Y284 106 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 LY96Q9Y6Y9 160 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 ODAMA1E959 279 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 MT-ND6P03923 174 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 C3orf79P0CE67 100 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 HINT1P49773 126 aaPredicted RBP11.16□□□□□ -0.62
COPS7B-221ENST00000488111 EDDM3BP56851 147 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 RPEL1Q2QD12 228 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 UHRF2Q96PU4 802 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 CCL19Q99731 98 aa11.16□□□□□ -0.62
COPS7B-221ENST00000488111 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
COPS7B-221ENST00000488111 RAI1Q7Z5J4 1906 aaPredicted RBP11.15□□□□□ -0.62
COPS7B-221ENST00000488111 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
COPS7B-221ENST00000488111 ZNF324O75467 553 aaPredicted RBP11.15□□□□□ -0.62
COPS7B-221ENST00000488111 TMEM11P17152 192 aa11.15□□□□□ -0.62
COPS7B-221ENST00000488111 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
COPS7B-221ENST00000488111 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
COPS7B-221ENST00000488111 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
COPS7B-221ENST00000488111 USP9YO00507 2555 aaPredicted RBP11.15□□□□□ -0.62
COPS7B-221ENST00000488111 TRAV34A0A0B4J273 112 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 C9JCJ5 164 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 OVOL3O00110 214 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 STAG3L2P0CL84 134 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 STAG3L3P0CL85 134 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
COPS7B-221ENST00000488111 SLC35E4Q6ICL7 350 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 PNKDQ8N490 385 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 PPP1R35Q8TAP8 253 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 RCHY1Q96PM5 261 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 TACC2O95359 2948 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-221ENST00000488111 MGST3O14880 152 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 FCN3O75636 299 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 PMCHP20382 165 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 WDR73Q6P4I2 378 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 C19orf35Q6ZS72 473 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 V9GYV3 84 aa11.14□□□□□ -0.63
COPS7B-221ENST00000488111 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 S1PR2O95136 353 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 G6PCP35575 357 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 EFNA4P52798 201 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 KRTAP10-9P60411 292 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
COPS7B-221ENST00000488111 TMEM136Q6ZRR5 245 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 RAMP3O60896 148 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 CA2P00918 260 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 RNF151Q2KHN1 245 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 COX19Q49B96 90 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 IGFBPL1Q8WX77 278 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 PSMG3-AS1Q96PY0 264 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 SLC25A10Q9UBX3 287 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-221ENST00000488111 YTHDF2Q9Y5A9 579 aaKnown RBP11.13□□□□□ -0.63
COPS7B-221ENST00000488111 FBN2P35556 2912 aa11.13□□□□□ -0.63
COPS7B-221ENST00000488111 HELZ2Q9BYK8 2649 aaKnown RBP11.13□□□□□ -0.63
COPS7B-221ENST00000488111 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 CELSR2Q9HCU4 2923 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 RRHO14718 337 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 CXorf1O96002 111 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 IGHV4-39P01824 125 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 RHOBP62745 196 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 HTD2P86397 168 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 PMCHL1Q16048 86 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 OR8I2Q8N0Y5 310 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 RFESDQ8TAC1 157 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-221ENST00000488111 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 MBNL3Q9NUK0 354 aaKnown RBP11.12□□□□□ -0.63
COPS7B-221ENST00000488111 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 CSMD2Q7Z408 3487 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 TRGV10A0A0A0MS01 117 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 RAB29O14966 203 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 OR10J4P0C629 311 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 CD1BP29016 333 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 SSTR5P35346 364 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 CX3CL1P78423 397 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 RHOGP84095 191 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 EIF4EBP1Q13541 118 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-221ENST00000488111 FAM53AQ6NSI3 398 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-221ENST00000488111 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 OR4F17Q8NGA8 305 aa11.12□□□□□ -0.63
COPS7B-221ENST00000488111 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms