RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 Q8N6K4 173 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 TERB2Q8NHR7 220 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 MRPS26Q9BYN8 205 aaKnown RBP0.52□□□□□ -2.33
PTEN-204ENST00000487939 C11orf68Q9H3H3 251 aaKnown RBP0.52□□□□□ -2.33
PTEN-204ENST00000487939 FBXL12Q9NXK8 326 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 RASL12Q9NYN1 266 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 DENND4CQ5VZ89 1909 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 TRBV6-8A0A0A6YYG3 113 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 DPRXA6NFQ7 191 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 PSMD12O00232 456 aaPredicted RBP0.51□□□□□ -2.33
PTEN-204ENST00000487939 ADGRB2O60241 1585 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 SNRNP200O75643 2136 aaKnown RBP0.51□□□□□ -2.33
PTEN-204ENST00000487939 HLA-DRB1P01911 266 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 SPCS3P61009 180 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 HIST3H3Q16695 136 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 RNASE10Q5GAN6 216 aaKnown RBP0.51□□□□□ -2.33
PTEN-204ENST00000487939 TOMM6Q96B49 74 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 OR52E6Q96RD3 313 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 NIPSNAP1Q9BPW8 284 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 SLC39A9Q9NUM3 307 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 GUCA1BQ9UMX6 200 aa0.51□□□□□ -2.33
PTEN-204ENST00000487939 WRNQ14191 1432 aaPredicted RBP eCLIP0.5□□□□□ -2.33
PTEN-204ENST00000487939 PQLC2LA1A4F0 135 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 SULT1B1O43704 296 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 PROSCO94903 275 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 RPL5P46777 297 aaKnown RBP0.5□□□□□ -2.33
PTEN-204ENST00000487939 SNRPD2P62316 118 aaKnown RBP0.5□□□□□ -2.33
PTEN-204ENST00000487939 CNBPP62633 177 aaKnown RBP0.5□□□□□ -2.33
PTEN-204ENST00000487939 HIST3H2BBQ8N257 126 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 ANKRD29Q8N6D5 301 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 SIGLECL1Q8N7X8 197 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 C4orf3Q8WVX3 66 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 BORCS5Q969J3 196 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 PPP1R2P1Q96PQ5 205 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 ERGIC3Q9Y282 383 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 DOCK3Q8IZD9 2030 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 TAF1LQ8IZX4 1826 aa0.5□□□□□ -2.33
PTEN-204ENST00000487939 E9PCH4 1651 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 MAP3K5Q99683 1374 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 ZFC3H1O60293 1989 aaKnown RBP0.49□□□□□ -2.33
PTEN-204ENST00000487939 CASP8AP2Q9UKL3 1982 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 SCN10AQ9Y5Y9 1956 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 TRAV9-1A0A075B6T8 112 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 TRAV3A0A0B4J244 114 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 TRAV12-1A0A0B4J245 112 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 EXOC1LA0A1B0GW35 172 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 BUB1B-PAK6H3BSN5 160 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 FAAHO00519 579 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 IFNA5P01569 189 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 HIST1H1EP10412 219 aaKnown RBP0.49□□□□□ -2.33
PTEN-204ENST00000487939 MGST1P10620 155 aaKnown RBP0.49□□□□□ -2.33
PTEN-204ENST00000487939 CD79AP11912 226 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 RPS20P60866 119 aaKnown RBP0.49□□□□□ -2.33
PTEN-204ENST00000487939 PSME3P61289 254 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 OR2F1Q13607 317 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 SPOPLQ6IQ16 392 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 H1FXQ92522 213 aaKnown RBP0.49□□□□□ -2.33
PTEN-204ENST00000487939 NHP2Q9NX24 153 aaKnown RBP0.49□□□□□ -2.33
PTEN-204ENST00000487939 PEAK1Q9H792 1746 aa0.49□□□□□ -2.33
PTEN-204ENST00000487939 MYH7BA7E2Y1 1941 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 SBF1O95248 1867 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 MTUS2Q5JR59 1369 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.48□□□□□ -2.33
PTEN-204ENST00000487939 A0A1W2PPM0 123 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 HIST1H1TP22492 207 aaPredicted RBP0.48□□□□□ -2.33
PTEN-204ENST00000487939 CDC42P60953 191 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 MPV17LQ2QL34 196 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 C1orf137Q5JT78 98 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 SOSTDC1Q6X4U4 206 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 HS3ST2Q9Y278 367 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 TMEM56-RWDD3S4R434 201 aa0.48□□□□□ -2.33
PTEN-204ENST00000487939 MYH10P35580 1976 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 CHP2O43745 196 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 LYZL6O75951 148 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 CRYZL1O95825 349 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 NKX2-5P52952 324 aaPredicted RBP0.47□□□□□ -2.33
PTEN-204ENST00000487939 MAGOHP61326 146 aaKnown RBP0.47□□□□□ -2.33
PTEN-204ENST00000487939 OR52R1Q8NGF1 315 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 TSPAN32Q96QS1 320 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 CDC42SE1Q9NRR8 79 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 SLC35A3Q9Y2D2 325 aa0.47□□□□□ -2.33
PTEN-204ENST00000487939 NUP155O75694 1391 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 HEATR1Q9H583 2144 aaKnown RBP0.46□□□□□ -2.34
PTEN-204ENST00000487939 CNTRLQ7Z7A1 2325 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 NCR3O14931 201 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 OR2J2O76002 312 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 AHSA1O95433 338 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 ZNF25P17030 456 aaPredicted RBP0.46□□□□□ -2.34
PTEN-204ENST00000487939 SULT1A1P50225 295 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 DEFB113Q30KQ7 82 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 CCDC122Q5T0U0 273 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 TRAPPC6BQ86SZ2 158 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 C3orf56Q8N813 242 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 OR10J5Q8NHC4 309 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 GPR146Q96CH1 333 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 TMEM70Q9BUB7 260 aa0.46□□□□□ -2.34
PTEN-204ENST00000487939 PARD6GQ9BYG4 376 aaPredicted RBP0.46□□□□□ -2.34
PTEN-204ENST00000487939 OR51V1Q9H2C8 321 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms