RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 C1orf137Q5JT78 98 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 TOMM6Q96B49 74 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 OR52E6Q96RD3 313 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 MRPS26Q9BYN8 205 aaKnown RBP0.47□□□□□ -2.33
USP34-216ENST00000487547 C10orf95Q9H7T3 257 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 TP73-AS1Q9UF72 201 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 ATP6V1DQ9Y5K8 247 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 CCDC88AQ3V6T2 1871 aa0.47□□□□□ -2.33
USP34-216ENST00000487547 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 DPRXA6NFQ7 191 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 PSMD12O00232 456 aaPredicted RBP0.46□□□□□ -2.34
USP34-216ENST00000487547 HLA-DRB1P01911 266 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 CALB1P05937 261 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 MGST1P10620 155 aaKnown RBP0.46□□□□□ -2.34
USP34-216ENST00000487547 C20orf196Q8IYI0 205 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 PATE1Q8WXA2 126 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 C11orf68Q9H3H3 251 aaKnown RBP0.46□□□□□ -2.34
USP34-216ENST00000487547 ERGIC3Q9Y282 383 aa0.46□□□□□ -2.34
USP34-216ENST00000487547 KIF13BQ9NQT8 1826 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 EML5Q05BV3 1969 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 TRAV9-1A0A075B6T8 112 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 SPCS3P61009 180 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 HIST3H3Q16695 136 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 ALKAL1Q6UXT8 129 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 ANKRD29Q8N6D5 301 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 OR10J5Q8NHC4 309 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 H1FXQ92522 213 aaKnown RBP0.45□□□□□ -2.34
USP34-216ENST00000487547 SLC35B4Q969S0 331 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 NIPSNAP1Q9BPW8 284 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 LLPHQ9BRT6 129 aaKnown RBP0.45□□□□□ -2.34
USP34-216ENST00000487547 CDC42SE1Q9NRR8 79 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 SLC35A3Q9Y2D2 325 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 EML6Q6ZMW3 1958 aa0.45□□□□□ -2.34
USP34-216ENST00000487547 TGIF2-C20orf24A0A0A6YYL0 155 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 ZNF736B4DX44 427 aaPredicted RBP0.44□□□□□ -2.34
USP34-216ENST00000487547 CETN3O15182 167 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 TGOLN2O43493 480 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 CD79AP11912 226 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 DEFA1P59665 94 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 SNRPD2P62316 118 aaKnown RBP0.44□□□□□ -2.34
USP34-216ENST00000487547 SPOPLQ6IQ16 392 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 C8orf74Q6P047 294 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 TEX261Q6UWH6 196 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 PTH2Q96A98 100 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 PKIGQ9Y2B9 76 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 U3KQ87 197 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 MAP3K5Q99683 1374 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 GPR98Q8WXG9 6306 aa0.44□□□□□ -2.34
USP34-216ENST00000487547 TRAV3A0A0B4J244 114 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 EXOC1LA0A1B0GW35 172 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 CCDC160A6NGH7 325 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 FAAHO00519 579 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 CRYZL1O95825 349 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 ZNF25P17030 456 aaPredicted RBP0.43□□□□□ -2.34
USP34-216ENST00000487547 PSME3P61289 254 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 TRAPPC6BQ86SZ2 158 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 C3orf56Q8N813 242 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 GPR146Q96CH1 333 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 PPP1R2P1Q96PQ5 205 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 OSTCQ9NRP0 149 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 TMEM56-RWDD3S4R434 201 aa0.43□□□□□ -2.34
USP34-216ENST00000487547 BUB1B-PAK6H3BSN5 160 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 DNAL4O96015 105 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 S100A4P26447 101 aaKnown RBP0.42□□□□□ -2.34
USP34-216ENST00000487547 RPL5P46777 297 aaKnown RBP0.42□□□□□ -2.34
USP34-216ENST00000487547 COTL1Q14019 142 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 CCDC122Q5T0U0 273 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 CLECL1Q8IZS7 167 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 TMEM86BQ8N661 226 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 TNRC6AQ8NDV7 1962 aaKnown RBP0.42□□□□□ -2.34
USP34-216ENST00000487547 E9PCH4 1651 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 NUP155O75694 1391 aa0.42□□□□□ -2.34
USP34-216ENST00000487547 KMT2DO14686 5537 aa0.41□□□□□ -2.34
USP34-216ENST00000487547 HIST1H1TP22492 207 aaPredicted RBP0.41□□□□□ -2.34
USP34-216ENST00000487547 RPS20P60866 119 aaKnown RBP0.41□□□□□ -2.34
USP34-216ENST00000487547 CDC42P60953 191 aa0.41□□□□□ -2.34
USP34-216ENST00000487547 CDKL4Q5MAI5 379 aa0.41□□□□□ -2.34
USP34-216ENST00000487547 TEX47Q8TBZ9 253 aa0.41□□□□□ -2.34
USP34-216ENST00000487547 DDI1Q8WTU0 396 aa0.41□□□□□ -2.34
USP34-216ENST00000487547 GUCA1BQ9UMX6 200 aa0.41□□□□□ -2.34
USP34-216ENST00000487547 COL1A1P02452 1464 aaPredicted RBP0.41□□□□□ -2.34
USP34-216ENST00000487547 PIRO00625 290 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 HIST1H1EP10412 219 aaKnown RBP0.4□□□□□ -2.35
USP34-216ENST00000487547 MAGOHP61326 146 aaKnown RBP0.4□□□□□ -2.35
USP34-216ENST00000487547 OR2F1Q13607 317 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 DEFB113Q30KQ7 82 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 GKN2Q86XP6 184 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 KRT222Q8N1A0 295 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 OR52R1Q8NGF1 315 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 OR13D1Q8NGV5 346 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 DCUN1D1Q96GG9 259 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 C6orf62Q9GZU0 229 aaPredicted RBP0.4□□□□□ -2.35
USP34-216ENST00000487547 OR51V1Q9H2C8 321 aa0.4□□□□□ -2.35
USP34-216ENST00000487547 UNC79Q9P2D8 2635 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 OR4C46A6NHA9 309 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 IFNA5P01569 189 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 SULT1A1P50225 295 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 EFNA4P52798 201 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 PSG9Q00887 426 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 CCDC90BQ9GZT6 254 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms