RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 hDV102S1A0JD36 115 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 HLA-DQA1P01909 254 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 OR10X1Q8NGY0 326 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 COMMD5Q9GZQ3 224 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 ZNRD1Q9P1U0 126 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 RNF114Q9Y508 228 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 J3QR06 171 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 K7EN84 100 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 MLNRO43193 412 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 AMY1AP04745 511 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 TSPOP30536 169 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 COLCA1Q6ZS62 124 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 Q6ZT83 130 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 LINC00596Q86U02 117 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 MUC15Q8N387 334 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 RPRMLQ8N4K4 120 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 OR4C46A6NHA9 309 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 MT-ND6P03923 174 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 IGLC3P0DOY3 106 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 BAHCC1Q9P281 2608 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 A0A1W2PN81 502 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 STAG3L2P0CL84 134 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 STAG3L3P0CL85 134 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 ACP7Q6ZNF0 438 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 FLYWCH2Q96CP2 140 aaKnown RBP10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 TMEM167BQ9NRX6 74 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 WNT2P09544 360 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 ZNF138P52744 262 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 MZT1Q08AG7 82 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 MRPS18CQ9Y3D5 142 aaKnown RBP10.19□□□□□ -0.78
SHROOM3-208ENST00000486758 EXPH5Q8NEV8 1989 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 ZZEF1O43149 2961 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 PYYP10082 97 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 PSG1P11464 419 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 Q6P435 159 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 FAM216BQ8N7L0 139 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 LGALS4P56470 323 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 GNG5P63218 68 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 RPL24P83731 157 aaKnown RBP10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 AMMECR1LQ6DCA0 310 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 ZBTB34Q8NCN2 500 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 TANC2Q9HCD6 1990 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 COL4A2P08572 1712 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 LEPROTL1O95214 131 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 TM4SF20Q53R12 229 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 S100A7AQ86SG5 101 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 ZFHX3Q15911 3703 aa10.18□□□□□ -0.78
SHROOM3-208ENST00000486758 LRBAP50851 2863 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 MPDU1O75352 247 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 HTR1DP28221 377 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 UBE2V1Q13404 147 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 OR4S2Q8NH73 311 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 OR9G1Q8NH87 305 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 TSKUQ8WUA8 353 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 CORO2AQ92828 525 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 SETD2Q9BYW2 2564 aaPredicted RBP10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 TDGF1P13385 188 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 TMEM116Q8NCL8 245 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 OR1B1Q8NGR6 318 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 SAP30LQ9HAJ7 183 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 AMMECR1Q9Y4X0 333 aaPredicted RBP10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 PPIAL4DF5H284 164 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 REG1AP05451 166 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 LINC00869P0C866 280 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 Q6ZS49 121 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 SNRNP40Q96DI7 357 aaKnown RBP10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 COQ2Q96H96 371 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 GSX1Q9H4S2 264 aaPredicted RBP10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 TP53TG3Q9ULZ0 132 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 SSUH2Q9Y2M2 353 aa10.17□□□□□ -0.78
SHROOM3-208ENST00000486758 IGHV2OR16-5A0A0B4J2B6 119 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 PRRX1P54821 245 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 SLAQ13239 276 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 TMEM144Q7Z5S9 345 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 MUC21A0A0G2JKD1 596 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 MUC21A0A140T8X8 626 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 HIGD1CA8MV81 97 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 OR5AL1P0C617 328 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 KIR2DL2P43627 348 aaPredicted RBP10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 COMPP49747 757 aaPredicted RBP10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 GAGE1Q13065 139 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 MUC21Q5SSG8 566 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 OR2T8A6NH00 312 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 PRRG2O14669 202 aa10.16□□□□□ -0.78
SHROOM3-208ENST00000486758 PPOXP50336 477 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms