RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 A0A1B0GV50 99 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 FCN1O00602 326 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 SRSF2Q01130 221 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 GAMTQ14353 236 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 ZNF726P1Q15940 193 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 ETFRF1Q6IPR1 90 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 SLC16A13Q7RTY0 426 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 RPP25LQ8N5L8 163 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 OR1P1Q8NH06 330 aa11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-204ENST00000486319 MAP1LC3B2A6NCE7 125 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 FSHBP01225 129 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 REG1AP05451 166 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 CCL20P78556 96 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 LCN15Q6UWW0 184 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 MAP1LC3BQ9GZQ8 125 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
POLR2J3-204ENST00000486319 TRAV40A0A0B4J280 105 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 NCBP2LA6PVI3 153 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 F8W036 122 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 APOC3P02656 99 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 AREGP15514 252 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 FXYD3Q14802 87 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 KLF17Q5JT82 389 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 FAM122CQ6P4D5 195 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 ZNF562Q6V9R5 426 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 ABHD5Q8WTS1 349 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 SSMEM1Q8WWF3 244 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 C22orf15Q8WYQ4 148 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 SEC11CQ9BY50 192 aa11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 F11RQ9Y624 299 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-204ENST00000486319 SEC14L6B5MCN3 397 aa11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 CDC34P49427 236 aaPredicted RBP11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 B2MP61769 119 aa11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 C10orf91Q5T1B1 145 aa11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 MIC13Q5XKP0 118 aa11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 SSX7Q7RTT5 188 aa11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 COL6A5A8TX70 2615 aa11.56□□□□□ -0.56
POLR2J3-204ENST00000486319 A0A1W2PPV4 95 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 IFNA1P01562 189 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 PRR20EP86478 221 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 PRR20CP86479 221 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 PRR20DP86480 221 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 PRR20BP86481 221 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 PRR20AP86496 221 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 PMS2P11Q13670 270 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 MLANAQ16655 118 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 FBLN7Q53RD9 439 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 STPG3Q8N7X2 389 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 RAB24Q969Q5 203 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 MISP3Q96FF7 219 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 YIF1AO95070 293 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 APELAP0DMC3 54 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 IGHV4-38-2P0DP08 117 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 ADCYAP1P18509 176 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 FGF8P55075 233 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 KRTAP24-1Q3LI83 254 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 Q8N9W7 124 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 OR2T6Q8NHC8 308 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 ARPC1AQ92747 370 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 ACY3Q96HD9 319 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 MEGF9Q9H1U4 602 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
POLR2J3-204ENST00000486319 IGKV1OR2-108A0A075B7D4 117 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 C9JQL5 133 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 HLA-DRB1P01911 266 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 CRYGCP07315 174 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 CTRB1P17538 263 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 OR10J1P30954 320 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 PPT1P50897 306 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 MFAP2P55001 183 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 HILS1P60008 231 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 CX3CL1P78423 397 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 DEFA5Q01523 94 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 HAGHQ16775 308 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 CTRB2Q6GPI1 263 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 RBMS3Q6XE24 437 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 SVBPQ8N300 66 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 THAP8Q8NA92 274 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 JMJD8Q96S16 334 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 RASL11BQ9BPW5 248 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 SLC35B3Q9H1N7 401 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
POLR2J3-204ENST00000486319 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms