RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 RNF2Q99496 336 aa16.36■□□□□ 0.21
HLA-F-228ENST00000486194 TMEM50AO95807 157 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 HTR2BP41595 481 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 PAFAH1B2P68402 229 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 IL22RA2Q969J5 263 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 GALNT14Q96FL9 552 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 MCUBQ9NWR8 336 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 TMEM56-RWDD3S4R434 201 aa16.35■□□□□ 0.21
HLA-F-228ENST00000486194 RPS10-NUDT3A0A1W2PQS6 291 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 UBE2CO00762 179 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 FAUP35544 74 aaKnown RBP16.34■□□□□ 0.21
HLA-F-228ENST00000486194 BSXQ3C1V8 233 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 ODF3L2Q3SX64 289 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 TOMM20LQ6UXN7 152 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 SOSTQ9BQB4 213 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 HEYLQ9NQ87 328 aaPredicted RBP16.34■□□□□ 0.21
HLA-F-228ENST00000486194 CACNG5Q9UF02 275 aa16.34■□□□□ 0.21
HLA-F-228ENST00000486194 PUS1Q9Y606 427 aaKnown RBP eCLIP16.34■□□□□ 0.21
HLA-F-228ENST00000486194 PIGBOS1A0A0B4J2F0 54 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 KIR2DL5BA0A0G2JN68 375 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 KIR2DL5BA0A0G2JPC4 375 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 CLN5O75503 358 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 AP3S2P59780 193 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 Q6ZWC4 215 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 KIR2DL5AQ8N109 375 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 OR4X1Q8NH49 305 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 KIR2DL5BQ8NHK3 375 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 GPR146Q96CH1 333 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 OVOL2Q9BRP0 275 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 TMEM231Q9H6L2 316 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 TP53TG1Q9Y2A0 90 aa16.33■□□□□ 0.2
HLA-F-228ENST00000486194 TRAV30A0A087WSZ9 112 aa16.32■□□□□ 0.2
HLA-F-228ENST00000486194 IGHV3-49A0A0A0MS15 119 aa16.32■□□□□ 0.2
HLA-F-228ENST00000486194 CEBPZOSA8MTT3 80 aa16.32■□□□□ 0.2
HLA-F-228ENST00000486194 ANXA3P12429 323 aa16.32■□□□□ 0.2
HLA-F-228ENST00000486194 NOXA1Q86UR1 476 aa16.32■□□□□ 0.2
HLA-F-228ENST00000486194 STPG3Q8N7X2 389 aa16.32■□□□□ 0.2
HLA-F-228ENST00000486194 SULT1A3P0DMM9 295 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 SULT1A4P0DMN0 295 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 SRPXP78539 464 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 TMEM187Q14656 261 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 C2orf83Q53S99 150 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 TCF24Q7RTU0 167 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 RNASEH2CQ8TDP1 164 aaKnown RBP16.31■□□□□ 0.2
HLA-F-228ENST00000486194 FNDC4Q9H6D8 234 aaPredicted RBP16.31■□□□□ 0.2
HLA-F-228ENST00000486194 VSIRQ9H7M9 311 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 ZFAND3Q9H8U3 227 aa16.31■□□□□ 0.2
HLA-F-228ENST00000486194 LCE6AA0A183 80 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 A0A1W2PS18 150 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 CCDC160A6NGH7 325 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 SLC25A4P12235 298 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 AKR1C4P17516 323 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 NPPCP23582 126 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 S100A5P33763 92 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 FAM90A2PQ658T7 463 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 SLC24A4Q8NFF2 622 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 TMEM230Q96A57 120 aa16.3■□□□□ 0.2
HLA-F-228ENST00000486194 IGKV3-7A0A075B6H7 116 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 IGHV3OR16-13A0A075B7E8 117 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 IGHV3-74A0A0B4J1X5 117 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 SPRY2O43597 315 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 TFPI2P48307 235 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 PYDC2Q56P42 97 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 ETFRF1Q6IPR1 90 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 WFDC3Q8IUB2 231 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 DEDD2Q8WXF8 326 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 ST8SIA2Q92186 375 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 NARS2Q96I59 477 aaKnown RBP16.29■□□□□ 0.2
HLA-F-228ENST00000486194 METTL26Q96S19 204 aa16.29■□□□□ 0.2
HLA-F-228ENST00000486194 TRAV2A0A0B4J234 112 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 A0A0B4J2A0 478 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 A0A1B0GU03 582 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 CCR6P51684 374 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 LGI3Q8N145 548 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 TOMM5Q8N4H5 51 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 SHPKQ9UHJ6 478 aa16.28■□□□□ 0.2
HLA-F-228ENST00000486194 DNASE2O00115 360 aaPredicted RBP16.27■□□□□ 0.2
HLA-F-228ENST00000486194 RPL11P62913 178 aaKnown RBP16.27■□□□□ 0.2
HLA-F-228ENST00000486194 MLANAQ16655 118 aa16.27■□□□□ 0.2
HLA-F-228ENST00000486194 NMSQ5H8A3 153 aa16.27■□□□□ 0.2
HLA-F-228ENST00000486194 APRG1Q8IVJ8 170 aa16.27■□□□□ 0.2
HLA-F-228ENST00000486194 GBGT1Q8N5D6 347 aa16.27■□□□□ 0.2
HLA-F-228ENST00000486194 OR1S2Q8NGQ3 325 aa16.27■□□□□ 0.2
HLA-F-228ENST00000486194 MAP6D1Q9H9H5 199 aa16.27■□□□□ 0.2
HLA-F-228ENST00000486194 MRPL36Q9P0J6 103 aaKnown RBP16.27■□□□□ 0.2
HLA-F-228ENST00000486194 DNAH7Q8WXX0 4024 aa16.26■□□□□ 0.19
HLA-F-228ENST00000486194 DFFBO76075 338 aa16.26■□□□□ 0.19
HLA-F-228ENST00000486194 RPL35AP18077 110 aaKnown RBP16.26■□□□□ 0.19
HLA-F-228ENST00000486194 NPY1RP25929 384 aa16.26■□□□□ 0.19
HLA-F-228ENST00000486194 KLF9Q13886 244 aaPredicted RBP16.26■□□□□ 0.19
HLA-F-228ENST00000486194 SMCO1Q147U7 214 aa16.26■□□□□ 0.19
HLA-F-228ENST00000486194 DEFB135Q30KP9 77 aa16.26■□□□□ 0.19
HLA-F-228ENST00000486194 TRIM63Q969Q1 353 aa16.26■□□□□ 0.19
HLA-F-228ENST00000486194 IGKV1-17P01599 117 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 APOHP02749 345 aaPredicted RBP16.25■□□□□ 0.19
HLA-F-228ENST00000486194 CRYBB3P26998 211 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 SUPT4H1P63272 117 aaKnown RBP16.25■□□□□ 0.19
HLA-F-228ENST00000486194 TNFRSF9Q07011 255 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 PRSS54Q6PEW0 395 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms