RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 GPHB5Q86YW7 130 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 LINC00482Q8N8I6 264 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 SMIM8Q96KF7 97 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 MAGT1Q9H0U3 335 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 MED28Q9H204 178 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 PSENENQ9NZ42 101 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 UFC1Q9Y3C8 167 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 IGHV4OR15-8A0A075B7B6 117 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 A0A087WW49 117 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 C7orf66A4D0T2 115 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 OR2T8A6NH00 312 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 SEC14L6B5MCN3 397 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 I3L2K1 104 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 K7EIM0 57 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 GOSR2O14653 212 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 TGOLN2O43493 480 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 SSSCA1O60232 199 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 IAPPP10997 89 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 GPR183P32249 361 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 BCAP31P51572 246 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 POLR2GP62487 172 aaKnown RBP eCLIP6.37□□□□□ -1.39
SF3A1-208ENST00000485618 KLF5Q13887 457 aaPredicted RBP6.37□□□□□ -1.39
SF3A1-208ENST00000485618 PVRIGQ6DKI7 326 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 C18orf65Q6ZTR6 163 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 OR10P1Q8NGE3 313 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 OR4D5Q8NGN0 318 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 OR4X1Q8NH49 305 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 MARC2Q969Z3 335 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
SF3A1-208ENST00000485618 OR10C1Q96KK4 312 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 DUX3Q96PT4 197 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 NMES1Q9C002 83 aa6.37□□□□□ -1.39
SF3A1-208ENST00000485618 MFSD2BA6NFX1 497 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 LGALS9O00182 355 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 BMPR1BO00238 502 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 NDUFA4O00483 81 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 CLN5O75503 358 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 YIF1AO95070 293 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 CFDP00746 253 aaPredicted RBP6.36□□□□□ -1.39
SF3A1-208ENST00000485618 IGHV3-23P01764 117 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 MBPP02686 304 aaPredicted RBP6.36□□□□□ -1.39
SF3A1-208ENST00000485618 SLURP1P55000 103 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 MFAP2P55001 183 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
SF3A1-208ENST00000485618 SYNJ2BPP57105 145 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 S100A10P60903 97 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 HBG1P69891 147 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 HBG2P69892 147 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 FGL1Q08830 312 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 RAB31Q13636 194 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 C19orf35Q6ZS72 473 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 S100A7AQ86SG5 101 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 STX12Q86Y82 276 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 TMEM116Q8NCL8 245 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 OR9G4Q8NGQ1 327 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 OR1S2Q8NGQ3 325 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 Q8WTZ3 238 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 GINS3Q9BRX5 216 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 GGACTQ9BVM4 153 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 SLC25A31Q9H0C2 315 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 MGAT4CQ9UBM8 478 aa6.36□□□□□ -1.39
SF3A1-208ENST00000485618 LSM5Q9Y4Y9 91 aaKnown RBP6.36□□□□□ -1.39
SF3A1-208ENST00000485618 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 MPTX1A8MV57 137 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 E5RGE8 158 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 PPP5D1E7EU14 171 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 CCSO14618 274 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 OR2C1O95371 312 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 TMEM50AO95807 157 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 CD5P06127 495 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 SPNP16150 400 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 NUP62P37198 522 aaPredicted RBP6.35□□□□□ -1.39
SF3A1-208ENST00000485618 CAV2P51636 162 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 CD69Q07108 199 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 OXA1LQ15070 435 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 ZNF600Q6ZNG1 722 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 SLC16A13Q7RTY0 426 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 REC114Q7Z4M0 266 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 DYNLRB2Q8TF09 96 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 DLX4Q92988 240 aaPredicted RBP6.35□□□□□ -1.39
SF3A1-208ENST00000485618 ACY3Q96HD9 319 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 SIGLEC8Q9NYZ4 499 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 TECRQ9NZ01 308 aaKnown RBP6.35□□□□□ -1.39
SF3A1-208ENST00000485618 DMRT1Q9Y5R6 373 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 ALG5Q9Y673 324 aa6.35□□□□□ -1.39
SF3A1-208ENST00000485618 A0A1W2PS18 150 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 ZFP92A6NM28 416 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 FNDC10F2Z333 226 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 K7EMT4 169 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 K7EPK0 472 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 SAP30O75446 220 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 CTSGP08311 255 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 IGLL1P15814 213 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 OR10J1P30954 320 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 S100A11P31949 105 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms