RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 MT-ND6P03923 174 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 GLRXP35754 106 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 GATA4P43694 442 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 ZNF121P58317 390 aaPredicted RBP6.28□□□□□ -1.4
USP4-211ENST00000485450 BSPH1Q075Z2 132 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 ZNF585BQ52M93 769 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 CNEP1R1Q8N9A8 125 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 TSKUQ8WUA8 353 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 DDB2Q92466 427 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 SLC25A22Q9H936 323 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 HELZ2Q9BYK8 2649 aaKnown RBP6.28□□□□□ -1.4
USP4-211ENST00000485450 ADGRG4Q8IZF6 3080 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 K7EP34 96 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 IER3P46695 156 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 ACSM6Q6P461 480 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 OR10V1Q8NGI7 309 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 OR5D13Q8NGL4 314 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 FNDC4Q9H6D8 234 aaPredicted RBP6.28□□□□□ -1.4
USP4-211ENST00000485450 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 VPREB3Q9UKI3 123 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 CR1P17927 2039 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 FREM1Q5H8C1 2179 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 IQCF6A8MYZ5 107 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 HMGB3O15347 200 aaKnown RBP6.28□□□□□ -1.4
USP4-211ENST00000485450 NHLRC4P0CG21 123 aaPredicted RBP6.28□□□□□ -1.4
USP4-211ENST00000485450 FUT6P51993 359 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 AESQ08117 197 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 OR8B8Q15620 311 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 TMEM42Q69YG0 159 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 GTF2H5Q6ZYL4 71 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 SCCPDHQ8NBX0 429 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 Q8TCH9 128 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 GALMQ96C23 342 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 OR4C12Q96R67 309 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 EMC6Q9BV81 110 aa6.28□□□□□ -1.4
USP4-211ENST00000485450 A0A087WX48 190 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 LYZL6O75951 148 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 NAPSAO96009 420 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 S100GP29377 79 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 OR8B3Q8NGG8 313 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 APOBEC3DQ96AK3 386 aaPredicted RBP6.27□□□□□ -1.41
USP4-211ENST00000485450 GPR82Q96P67 336 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 OR8B2Q96RD0 313 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 KCNIP2Q9NS61 270 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 CELSR2Q9HCU4 2923 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 FBLL1A6NHQ2 334 aaKnown RBP6.27□□□□□ -1.41
USP4-211ENST00000485450 NDUFB4O95168 129 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 CR1LQ2VPA4 569 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 OR10G9Q8NGN4 311 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 OR10G7Q8NGN6 311 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 ST6GALNAC6Q969X2 333 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 C10orf35Q96D05 121 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 CHRDL1Q9BU40 450 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 PPDPFQ9H3Y8 114 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 HES4Q9HCC6 221 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 UFC1Q9Y3C8 167 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 CACNA1BQ00975 2339 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 MYO7BQ6PIF6 2116 aa6.27□□□□□ -1.41
USP4-211ENST00000485450 TRBV20OR9-2A0A075B6H5 130 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 THBS3P49746 956 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 GRB2P62993 217 aaKnown RBP6.26□□□□□ -1.41
USP4-211ENST00000485450 COX19Q49B96 90 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 RNF152Q8N8N0 203 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 GJC3Q8NFK1 279 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 OR2AE1Q8NHA4 323 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 GLMPQ8WWB7 406 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 QTRT1Q9BXR0 403 aaKnown RBP6.26□□□□□ -1.41
USP4-211ENST00000485450 PSENENQ9NZ42 101 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 IL36GQ9NZH8 169 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 ZFYVE26Q68DK2 2539 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 HLA-DRB1P01911 266 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 EGR1P18146 543 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 DMRTC1Q5HYR2 192 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 SLC35E4Q6ICL7 350 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 ZNF439Q8NDP4 499 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 LINC01560Q8TB33 94 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 CITED2Q99967 270 aaPredicted RBP6.26□□□□□ -1.41
USP4-211ENST00000485450 MTCH1Q9NZJ7 389 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 A0A1W2PPV4 95 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 PSMB11A5LHX3 300 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 CYSRT1A8MQ03 144 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 H0Y980 276 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 SYNGR2O43760 224 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 GUCA1AP43080 201 aaPredicted RBP6.26□□□□□ -1.41
USP4-211ENST00000485450 KRTAP10-9P60411 292 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 ZNF818PQ6ZRF7 136 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 OR1F12Q8NHA8 337 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 PERPQ96FX8 193 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 C18orf15Q96N68 181 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 COMMD5Q9GZQ3 224 aa6.26□□□□□ -1.41
USP4-211ENST00000485450 ESPL1Q14674 2120 aa6.25□□□□□ -1.41
USP4-211ENST00000485450 PIGBOS1A0A0B4J2F0 54 aa6.25□□□□□ -1.41
USP4-211ENST00000485450 A0A0G2JRQ6 117 aa6.25□□□□□ -1.41
USP4-211ENST00000485450 UBE2L5PA0A1B0GUS4 154 aa6.25□□□□□ -1.41
USP4-211ENST00000485450 FAM181BA6NEQ2 426 aa6.25□□□□□ -1.41
USP4-211ENST00000485450 ZNF32P17041 273 aa6.25□□□□□ -1.41
USP4-211ENST00000485450 RPEL1Q2QD12 228 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms