RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C15orf62A8K5M9 175 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 F8W735 103 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-227ENST00000485102 PLA2G10O15496 165 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 PRAF2O60831 178 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 DEDDO75618 318 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 S1PR2O95136 353 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 PTTG1O95997 202 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 TCRBP04435 133 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 AKR1C4P17516 323 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 UCP1P25874 307 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 ADMP35318 185 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 TMED4Q7Z7H5 227 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 LGI3Q8N145 548 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 DUSP18Q8NEJ0 188 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 RNASE11Q8TAA1 199 aaKnown RBP9.58□□□□□ -0.88
HDAC6-227ENST00000485102 MFFQ9GZY8 342 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 TMEM222Q9H0R3 208 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 CSTL1Q9H114 145 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
HDAC6-227ENST00000485102 GPN1Q9HCN4 374 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-227ENST00000485102 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
HDAC6-227ENST00000485102 OR2T8A6NH00 312 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 CDS2O95674 445 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 TRAPPC2P0DI81 140 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 TRAPPC2BP0DI82 140 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 OR13C7P0DN81 318 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 LPAR6P43657 344 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 WT1-ASQ06250 92 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 H2BFWTQ7Z2G1 175 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 OR10W1Q8NGF6 305 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 OR1L8Q8NGR8 309 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 SCARB1Q8WTV0 552 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 RBPMSQ93062 196 aaKnown RBP9.57□□□□□ -0.88
HDAC6-227ENST00000485102 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 C20orf85Q9H1P6 137 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 TMEM140Q9NV12 185 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 C21orf62Q9NYP8 219 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 SMPXQ9UHP9 88 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 PRNDQ9UKY0 176 aa9.57□□□□□ -0.88
HDAC6-227ENST00000485102 F11RQ9Y624 299 aaKnown RBP9.57□□□□□ -0.88
HDAC6-227ENST00000485102 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 TEX50A0A1B0GTY4 177 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 H2AFB2P0C5Z0 115 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
HDAC6-227ENST00000485102 VAMP1P23763 118 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 FCGR2BP31994 310 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-227ENST00000485102 CCR6P51684 374 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 AKR1C2P52895 323 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 MFAP2P55001 183 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 C4orf46Q504U0 113 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 SLC25A24Q6NUK1 477 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 LRTM2Q8N967 370 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 LSM10Q969L4 123 aaKnown RBP9.56□□□□□ -0.88
HDAC6-227ENST00000485102 ZNF414Q96IQ9 312 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 TMEM56Q96MV1 263 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 RARRES2Q99969 163 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 PDCD10Q9BUL8 212 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 TMEM56-RWDD3S4R434 201 aa9.56□□□□□ -0.88
HDAC6-227ENST00000485102 PCLOQ9Y6V0 5065 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 A0A0B4J2A0 478 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 K7EIM0 57 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 SFT2D2O95562 160 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 IFNA21P01568 189 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 CTSGP08311 255 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 OR5AC1P0C628 307 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 OR4E1P0C645 316 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 PI3P19957 117 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 RGS21Q2M5E4 152 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 OR5B3Q8NH48 314 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 OR4A16Q8NH70 328 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 C11orf45Q8TAV5 145 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 MRGPRFQ96AM1 343 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 OR10C1Q96KK4 312 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 C20orf24Q9BUV8 137 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 NUDT15Q9NV35 164 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 SHPKQ9UHJ6 478 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 TBC1D24Q9ULP9 559 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 TMED3Q9Y3Q3 217 aa9.55□□□□□ -0.88
HDAC6-227ENST00000485102 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 CHEK1O14757 476 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 KRASP01116 189 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 IFNA4P05014 189 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 IL5P05113 134 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 CD5P06127 495 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 SLC25A6P12236 298 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 BTCP35070 178 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 APRG1Q8IVJ8 170 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 GLYATL2Q8WU03 294 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 TP53RKQ96S44 253 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 RNF2Q99496 336 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 TXN2Q99757 166 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 RHPN1-AS1Q9BWJ2 59 aa9.54□□□□□ -0.88
HDAC6-227ENST00000485102 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
HDAC6-227ENST00000485102 PRR20EP86478 221 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 PRR20CP86479 221 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 PRR20DP86480 221 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 PRR20BP86481 221 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms