RNA–Protein interactions for RNA: ENST00000484986.1

PTPRN-215, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-215ENST00000484986 OR4X1Q8NH49 305 aa16.16■□□□□ 0.18
PTPRN-215ENST00000484986 RRNAD1Q96FB5 475 aaKnown RBP16.16■□□□□ 0.18
PTPRN-215ENST00000484986 FUNDC2Q9BWH2 189 aa16.16■□□□□ 0.18
PTPRN-215ENST00000484986 FAM25AB3EWG3 89 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 FAM25CB3EWG5 89 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 FAM25GB3EWG6 89 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 C11orf94C9JXX5 98 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 CLN5O75503 358 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 B3GALNT1O75752 331 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 RNASE2P10153 161 aaKnown RBP16.15■□□□□ 0.18
PTPRN-215ENST00000484986 OPRK1P41145 380 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 ETV6P41212 452 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 RPL5P46777 297 aaKnown RBP16.15■□□□□ 0.18
PTPRN-215ENST00000484986 VBP1P61758 197 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 CCDC71LQ8N9Z2 235 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 ZFAND1Q8TCF1 268 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 AP3S1Q92572 193 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 GRAMD2BQ96HH9 432 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 HRH4Q9H3N8 390 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 COPZ2Q9P299 210 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 KLK11Q9UBX7 282 aa16.15■□□□□ 0.18
PTPRN-215ENST00000484986 EIF2B2P49770 351 aaKnown RBP16.14■□□□□ 0.17
PTPRN-215ENST00000484986 MORN3Q6PF18 240 aaPredicted RBP16.14■□□□□ 0.17
PTPRN-215ENST00000484986 RNASE11Q8TAA1 199 aaKnown RBP16.14■□□□□ 0.17
PTPRN-215ENST00000484986 C15orf40Q8WUR7 153 aa16.14■□□□□ 0.17
PTPRN-215ENST00000484986 TMEM230Q96A57 120 aa16.14■□□□□ 0.17
PTPRN-215ENST00000484986 VPS13DQ5THJ4 4388 aa16.14■□□□□ 0.17
PTPRN-215ENST00000484986 TRAV30A0A087WSZ9 112 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 DEFB4AO15263 64 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 CD3DP04234 171 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 SPP1P10451 314 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 CRYBB3P26998 211 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 CENPSQ8N2Z9 138 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 FAM24BQ8N5W8 94 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 STXBP6Q8NFX7 210 aa16.13■□□□□ 0.17
PTPRN-215ENST00000484986 RPS10-NUDT3A0A1W2PQS6 291 aa16.12■□□□□ 0.17
PTPRN-215ENST00000484986 K7EQG2 157 aa16.12■□□□□ 0.17
PTPRN-215ENST00000484986 P2RY1P47900 373 aa16.12■□□□□ 0.17
PTPRN-215ENST00000484986 TRPT1Q86TN4 253 aaKnown RBP16.12■□□□□ 0.17
PTPRN-215ENST00000484986 Q8NAQ8 132 aa16.12■□□□□ 0.17
PTPRN-215ENST00000484986 TERB2Q8NHR7 220 aa16.12■□□□□ 0.17
PTPRN-215ENST00000484986 MTFP1Q9UDX5 166 aa16.12■□□□□ 0.17
PTPRN-215ENST00000484986 MIFP14174 115 aa16.11■□□□□ 0.17
PTPRN-215ENST00000484986 UCP1P25874 307 aa16.11■□□□□ 0.17
PTPRN-215ENST00000484986 SP6Q3SY56 376 aa16.11■□□□□ 0.17
PTPRN-215ENST00000484986 RNASE12Q5GAN4 147 aaKnown RBP16.11■□□□□ 0.17
PTPRN-215ENST00000484986 FAM219AQ8IW50 185 aa16.11■□□□□ 0.17
PTPRN-215ENST00000484986 OR52I2Q8NH67 350 aa16.11■□□□□ 0.17
PTPRN-215ENST00000484986 FNDC4Q9H6D8 234 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-215ENST00000484986 HELTA6NFD8 242 aa16.1■□□□□ 0.17
PTPRN-215ENST00000484986 HTR2BP41595 481 aa16.1■□□□□ 0.17
PTPRN-215ENST00000484986 PPP5CP53041 499 aa16.1■□□□□ 0.17
PTPRN-215ENST00000484986 SPCS3P61009 180 aa16.1■□□□□ 0.17
PTPRN-215ENST00000484986 BSXQ3C1V8 233 aa16.1■□□□□ 0.17
PTPRN-215ENST00000484986 OR52E5Q8NH55 327 aa16.1■□□□□ 0.17
PTPRN-215ENST00000484986 MRPL36Q9P0J6 103 aaKnown RBP16.1■□□□□ 0.17
PTPRN-215ENST00000484986 IGLL5B9A064 214 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 IGKV1-17P01599 117 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 ZNF688P0C7X2 276 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 AP2S1P53680 142 aaPredicted RBP16.09■□□□□ 0.17
PTPRN-215ENST00000484986 TAS2R19P59542 299 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 TMEM229BQ8NBD8 167 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 OR13C8Q8NGS7 320 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.09■□□□□ 0.17
PTPRN-215ENST00000484986 EXTL2Q9UBQ6 330 aa16.09■□□□□ 0.17
PTPRN-215ENST00000484986 DNAH6Q9C0G6 4158 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 IGHV4-28A0A0C4DH34 117 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 GIG44P09565 113 aaPredicted RBP16.08■□□□□ 0.16
PTPRN-215ENST00000484986 MLANAQ16655 118 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 SCGB2B2Q4G0G5 96 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 AARDQ4LEZ3 155 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 DCANP1Q8TF63 244 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 Q8WTZ3 238 aa16.08■□□□□ 0.16
PTPRN-215ENST00000484986 ZNF705EA8MWA4 302 aaPredicted RBP16.07■□□□□ 0.16
PTPRN-215ENST00000484986 RAB3DO95716 219 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 CD74P04233 296 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 SLC25A4P12235 298 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 ZNF182P17025 639 aaPredicted RBP16.07■□□□□ 0.16
PTPRN-215ENST00000484986 TIGITQ495A1 244 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 OR1S2Q8NGQ3 325 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 RNASEH2CQ8TDP1 164 aaKnown RBP16.07■□□□□ 0.16
PTPRN-215ENST00000484986 ABHD1Q96SE0 405 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 TMEM222Q9H0R3 208 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 HEYLQ9NQ87 328 aaPredicted RBP16.07■□□□□ 0.16
PTPRN-215ENST00000484986 CACFD1Q9UGQ2 172 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 APLNQ9ULZ1 77 aa16.07■□□□□ 0.16
PTPRN-215ENST00000484986 HECTD4Q9Y4D8 3996 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 A0A0G2JRQ6 117 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 CDS2O95674 445 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 RBMY1A1P0DJD3 496 aaKnown RBP16.06■□□□□ 0.16
PTPRN-215ENST00000484986 RBMY1CP0DJD4 496 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 PRR20EP86478 221 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 PRR20CP86479 221 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 PRR20DP86480 221 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 PRR20BP86481 221 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 PRR20AP86496 221 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 DHRS2Q13268 280 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 RBMY1FQ15415 496 aaKnown RBP16.06■□□□□ 0.16
PTPRN-215ENST00000484986 ACTL10Q5JWF8 245 aa16.06■□□□□ 0.16
PTPRN-215ENST00000484986 STEAP1BQ6NZ63 245 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms