RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 IGKV3-7A0A075B6H7 116 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 IGHV3OR16-13A0A075B7E8 117 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 IGHV3-74A0A0B4J1X5 117 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 NPPCP23582 126 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 CRYBB3P26998 211 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 TAS2R19P59542 299 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 OR11H2Q8NH07 326 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 GRAMD2BQ96HH9 432 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 ABHD1Q96SE0 405 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-206ENST00000484733 ENY2Q9NPA8 101 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 ETV6P41212 452 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 HOXA1P49639 335 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-206ENST00000484733 DEFB131AP59861 70 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 SPCS3P61009 180 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 OR13C8Q8NGS7 320 aa8.38□□□□□ -1.07
SCFD1-206ENST00000484733 RRNAD1Q96FB5 475 aaKnown RBP8.38□□□□□ -1.07
SCFD1-206ENST00000484733 K7EQG2 157 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 CDS2O95674 445 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 RAB3DO95716 219 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 TCTAP57738 103 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 MRPS10P82664 201 aaKnown RBP8.37□□□□□ -1.07
SCFD1-206ENST00000484733 TMEM187Q14656 261 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 TRIM16LQ309B1 348 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 RNASE12Q5GAN4 147 aaKnown RBP8.37□□□□□ -1.07
SCFD1-206ENST00000484733 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 METTL26Q96S19 204 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 A0A0G2JRQ6 117 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 RPS10-NUDT3A0A1W2PQS6 291 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 CA1P00915 261 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-206ENST00000484733 PPP5CP53041 499 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 DHODHQ02127 395 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 SP6Q3SY56 376 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 STEAP1BQ6NZ63 245 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 OR4D10Q8NGI6 311 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-206ENST00000484733 MRPL36Q9P0J6 103 aaKnown RBP8.37□□□□□ -1.07
SCFD1-206ENST00000484733 U3KQE9 123 aa8.37□□□□□ -1.07
SCFD1-206ENST00000484733 TEX13DA0A0J9YY54 714 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 GABARAPH6UMI1 98 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 HTR2BP41595 481 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 MEF2DQ14814 521 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 RBMS2Q15434 407 aaKnown RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 SURF2Q15527 256 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 Q6ZRM9 215 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 FAM24BQ8N5W8 94 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 MARCH1Q8TCQ1 289 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 NAA50Q9GZZ1 169 aaKnown RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 MIXL1Q9H2W2 232 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 IGHV3-66A0A0C4DH42 116 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 IFNA4P05014 189 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 SMIM18P0DKX4 95 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 OPRK1P41145 380 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 MLANAQ16655 118 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 C2orf83Q53S99 150 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 GPR107Q5VW38 600 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 STHQ8IWL8 128 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 OR1S2Q8NGQ3 325 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 RNASEH2CQ8TDP1 164 aaKnown RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 TMEM230Q96A57 120 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 RTBDNQ9BSG5 229 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 HRH4Q9H3N8 390 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 RABL2AQ9UBK7 228 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-206ENST00000484733 RABL2BQ9UNT1 228 aa8.36□□□□□ -1.07
SCFD1-206ENST00000484733 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 SPP1P10451 314 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 SLC25A4P12235 298 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 P2RY1P47900 373 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 YPEL3P61236 119 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 SCGB2B2Q4G0G5 96 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 SELENOHQ8IZQ5 122 aaKnown RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 GLYATL2Q8WU03 294 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 NAA60Q9H7X0 242 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 CACFD1Q9UGQ2 172 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 RABAC1Q9UI14 185 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 C14orf166Q9Y224 244 aaKnown RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 CTDSPLO15194 276 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 GIG44P09565 113 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 TIGITQ495A1 244 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 RNASE11Q8TAA1 199 aaKnown RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 RBPMSQ93062 196 aaKnown RBP8.35□□□□□ -1.07
SCFD1-206ENST00000484733 GPR132Q9UNW8 380 aa8.35□□□□□ -1.07
SCFD1-206ENST00000484733 DISC1C4P0D8 188 aa8.34□□□□□ -1.07
SCFD1-206ENST00000484733 OR5AC1P0C628 307 aa8.34□□□□□ -1.07
SCFD1-206ENST00000484733 EIF2B2P49770 351 aaKnown RBP8.34□□□□□ -1.07
SCFD1-206ENST00000484733 Q8NAQ8 132 aa8.34□□□□□ -1.07
SCFD1-206ENST00000484733 LHFPL5Q8TAF8 219 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms