RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 MLANAQ16655 118 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 CEMP1Q6PRD7 247 aaPredicted RBP15.85■□□□□ 0.13
USP40-215ENST00000484528 FNDC4Q9H6D8 234 aaPredicted RBP15.85■□□□□ 0.13
USP40-215ENST00000484528 VSIRQ9H7M9 311 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 DNASE2O00115 360 aaPredicted RBP15.84■□□□□ 0.13
USP40-215ENST00000484528 SUB1P53999 127 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP40-215ENST00000484528 CMC4P56277 68 aaPredicted RBP15.84■□□□□ 0.13
USP40-215ENST00000484528 PAFAH1B2P68402 229 aa15.84■□□□□ 0.13
USP40-215ENST00000484528 LEMD1Q68G75 181 aa15.84■□□□□ 0.13
USP40-215ENST00000484528 PVRIGQ6DKI7 326 aa15.84■□□□□ 0.13
USP40-215ENST00000484528 Q6ZRM9 215 aa15.84■□□□□ 0.13
USP40-215ENST00000484528 FAM24BQ8N5W8 94 aa15.84■□□□□ 0.13
USP40-215ENST00000484528 MS4A6AQ9H2W1 248 aa15.84■□□□□ 0.13
USP40-215ENST00000484528 GABARAPH6UMI1 98 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 CORTO00230 105 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 CTDSP2O14595 271 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 OR5AC1P0C628 307 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 DEFB131AP59861 70 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 TMEM217Q8N7C4 229 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 LHFPL5Q8TAF8 219 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 C15orf40Q8WUR7 153 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 RABAC1Q9UI14 185 aa15.83■□□□□ 0.12
USP40-215ENST00000484528 SPCS2Q15005 226 aa15.82■□□□□ 0.12
USP40-215ENST00000484528 RARRES2Q99969 163 aa15.82■□□□□ 0.12
USP40-215ENST00000484528 TMEM222Q9H0R3 208 aa15.82■□□□□ 0.12
USP40-215ENST00000484528 C14orf166Q9Y224 244 aaKnown RBP15.82■□□□□ 0.12
USP40-215ENST00000484528 TEX13DA0A0J9YY54 714 aaPredicted RBP15.81■□□□□ 0.12
USP40-215ENST00000484528 CLN5O75503 358 aa15.81■□□□□ 0.12
USP40-215ENST00000484528 CA1P00915 261 aaPredicted RBP15.81■□□□□ 0.12
USP40-215ENST00000484528 ATF4P18848 351 aaPredicted RBP15.81■□□□□ 0.12
USP40-215ENST00000484528 GPR141Q7Z602 305 aa15.81■□□□□ 0.12
USP40-215ENST00000484528 RTBDNQ9BSG5 229 aaPredicted RBP15.81■□□□□ 0.12
USP40-215ENST00000484528 NAA60Q9H7X0 242 aa15.81■□□□□ 0.12
USP40-215ENST00000484528 CD5P06127 495 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 MEF2DQ14814 521 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 TIGITQ495A1 244 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 STXBP6Q8NFX7 210 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 OR11H2Q8NH07 326 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 GLYATL2Q8WU03 294 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 GATAD1Q8WUU5 269 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 MRPS26Q9BYN8 205 aaKnown RBP15.8■□□□□ 0.12
USP40-215ENST00000484528 TMEM231Q9H6L2 316 aa15.8■□□□□ 0.12
USP40-215ENST00000484528 KLK5Q9Y337 293 aaPredicted RBP15.8■□□□□ 0.12
USP40-215ENST00000484528 NXPH3O95157 252 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 CDS2O95674 445 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 NPPCP23582 126 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 SPCS3P61009 180 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 BSXQ3C1V8 233 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 SELENOHQ8IZQ5 122 aaKnown RBP15.79■□□□□ 0.12
USP40-215ENST00000484528 OR4C16Q8NGL9 310 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 OR4X1Q8NH49 305 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 PHLDA1Q8WV24 401 aaPredicted RBP15.79■□□□□ 0.12
USP40-215ENST00000484528 SMIM4Q8WVI0 70 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 RBPMSQ93062 196 aaKnown RBP15.79■□□□□ 0.12
USP40-215ENST00000484528 TMEM230Q96A57 120 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 METTL26Q96S19 204 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 HEYLQ9NQ87 328 aaPredicted RBP15.79■□□□□ 0.12
USP40-215ENST00000484528 CACNG5Q9UF02 275 aa15.79■□□□□ 0.12
USP40-215ENST00000484528 DISC1C4P0D8 188 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 DEFB4AO15263 64 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 B3GALNT1O75752 331 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 IGKV1-17P01599 117 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 P2RY1P47900 373 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 ALDH3B2P48448 385 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 NANOS2P60321 138 aaKnown RBP15.78■□□□□ 0.12
USP40-215ENST00000484528 MRPS10P82664 201 aaKnown RBP15.78■□□□□ 0.12
USP40-215ENST00000484528 SSBP1Q04837 148 aaKnown RBP15.78■□□□□ 0.12
USP40-215ENST00000484528 IL18Q14116 193 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 TMEM268Q5VZI3 342 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 FAM219AQ8IW50 185 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 GPR146Q96CH1 333 aa15.78■□□□□ 0.12
USP40-215ENST00000484528 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.78■□□□□ 0.12
USP40-215ENST00000484528 AKAIN1P0CW23 69 aa15.77■□□□□ 0.12
USP40-215ENST00000484528 RPL5P46777 297 aaKnown RBP15.77■□□□□ 0.12
USP40-215ENST00000484528 CLVS1Q8IUQ0 354 aaPredicted RBP15.77■□□□□ 0.12
USP40-215ENST00000484528 DIRAS2Q96HU8 199 aa15.77■□□□□ 0.12
USP40-215ENST00000484528 PRR13Q9NZ81 148 aa15.77■□□□□ 0.12
USP40-215ENST00000484528 FBXL17Q9UF56 701 aa15.77■□□□□ 0.12
USP40-215ENST00000484528 TRAV2A0A0B4J234 112 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 A0A1W2PS18 150 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 CEBPZOSA8MTT3 80 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 SCGB2A1O75556 95 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 CRYBB3P26998 211 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 HTR2BP41595 481 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 RND2P52198 227 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 RBMS2Q15434 407 aaKnown RBP15.76■□□□□ 0.11
USP40-215ENST00000484528 AARDQ4LEZ3 155 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 STHQ8IWL8 128 aa15.76■□□□□ 0.11
USP40-215ENST00000484528 CRYM-AS1A6NIL9 109 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 K7EQG2 157 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 ZNF688P0C7X2 276 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 DHODHQ02127 395 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 TMEM187Q14656 261 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 SURF2Q15527 256 aaPredicted RBP15.75■□□□□ 0.11
USP40-215ENST00000484528 SLC24A4Q8NFF2 622 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 OR51S1Q8NGJ8 323 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 OR52E5Q8NH55 327 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 C11orf68Q9H3H3 251 aaKnown RBP15.75■□□□□ 0.11
USP40-215ENST00000484528 GPR132Q9UNW8 380 aa15.75■□□□□ 0.11
USP40-215ENST00000484528 RPS10-NUDT3A0A1W2PQS6 291 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms