RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 DEFA1P59665 94 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 DEFA3P59666 94 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 OR2K2Q8NGT1 345 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 MARC2Q969Z3 335 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 CHRDL1Q9BU40 450 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 PRKDCP78527 4128 aaKnown RBP12.61□□□□□ -0.39
HMGN1-214ENST00000482733 ADAP1O75689 374 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 IFNA10P01566 189 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 FOLR2P14207 255 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 SPNP16150 400 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 ADMP35318 185 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 IFITM3Q01628 133 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 ETFRF1Q6IPR1 90 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
HMGN1-214ENST00000482733 CIB3Q96Q77 187 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-214ENST00000482733 TECRQ9NZ01 308 aaKnown RBP12.61□□□□□ -0.39
HMGN1-214ENST00000482733 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 IGHV3-48P01763 117 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 SLC25A4P12235 298 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 GP9P14770 177 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 CBLN1P23435 193 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 RPP30P78346 268 aaKnown RBP12.6□□□□□ -0.39
HMGN1-214ENST00000482733 LCN12Q6JVE5 192 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 UNQ9165/PRO28630Q6UXU0 137 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 OR52B4Q8NGK2 314 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 ZNF431Q8TF32 576 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-214ENST00000482733 PRR25Q96S07 402 aa12.6□□□□□ -0.39
HMGN1-214ENST00000482733 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
HMGN1-214ENST00000482733 K7EMT4 169 aa12.59□□□□□ -0.39
HMGN1-214ENST00000482733 SYNGR2O43760 224 aa12.59□□□□□ -0.39
HMGN1-214ENST00000482733 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-214ENST00000482733 MRPL27Q9P0M9 148 aaKnown RBP12.59□□□□□ -0.39
HMGN1-214ENST00000482733 TRAV30A0A087WSZ9 112 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 C15orf62A8K5M9 175 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 CLN5O75503 358 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 TMEM50AO95807 157 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 IL5P05113 134 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 C8orf88P0DMB2 117 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 RAB11AP62491 216 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 TM4SF20Q53R12 229 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 DEFB121Q5J5C9 76 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 ADAMTSL5Q6ZMM2 481 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 HAPLN4Q86UW8 402 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
HMGN1-214ENST00000482733 DAZ1Q9NQZ3 744 aaKnown RBP12.58□□□□□ -0.4
HMGN1-214ENST00000482733 IFNA4P05014 189 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 NKX2-1P43699 371 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-214ENST00000482733 ID3Q02535 119 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 IAH1Q2TAA2 248 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-214ENST00000482733 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 NRARPQ7Z6K4 114 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 C12orf45Q8N5I9 185 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-214ENST00000482733 UXS1Q8NBZ7 420 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 TMEM116Q8NCL8 245 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 OR4D5Q8NGN0 318 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 SEC22CQ9BRL7 303 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 C20orf24Q9BUV8 137 aa12.57□□□□□ -0.4
HMGN1-214ENST00000482733 MPTX1A8MV57 137 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 WRBO00258 174 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 YIF1AO95070 293 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 IAPPP10997 89 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 GPX4P36969 197 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-214ENST00000482733 CD69Q07108 199 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 MLANAQ16655 118 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-214ENST00000482733 C11orf87Q6NUJ2 197 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 ZNF600Q6ZNG1 722 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 CACNG8Q8WXS5 425 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 OR10C1Q96KK4 312 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 MAGT1Q9H0U3 335 aa12.56□□□□□ -0.4
HMGN1-214ENST00000482733 GPN1Q9HCN4 374 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-214ENST00000482733 LSM4Q9Y4Z0 139 aaKnown RBP12.56□□□□□ -0.4
HMGN1-214ENST00000482733 PRAF2O60831 178 aa12.55□□□□□ -0.4
HMGN1-214ENST00000482733 SLC16A13Q7RTY0 426 aa12.55□□□□□ -0.4
HMGN1-214ENST00000482733 ZBTB8BQ8NAP8 495 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-214ENST00000482733 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
HMGN1-214ENST00000482733 GINS3Q9BRX5 216 aa12.55□□□□□ -0.4
HMGN1-214ENST00000482733 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
HMGN1-214ENST00000482733 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 INMT-MINDY4F8WBC2 141 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 EDN2P20800 178 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 RND2P52198 227 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 POLR2GP62487 172 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGN1-214ENST00000482733 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 MLXQ9UH92 298 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 STRAPQ9Y3F4 350 aaKnown RBP12.54□□□□□ -0.4
HMGN1-214ENST00000482733 SMAD5-AS1Q9Y6J3 95 aa12.54□□□□□ -0.4
HMGN1-214ENST00000482733 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 IGLC1P0CG04 106 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 OR10J1P30954 320 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 BMI1P35226 326 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 BTNL8Q6UX41 500 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 TOMM20LQ6UXN7 152 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 GTSCR1Q86UQ5 136 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 ZNF414Q96IQ9 312 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 SLC35E1Q96K37 410 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms