RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 A8MWP6 167 aa15.9■□□□□ 0.14
SEC13-217ENST00000482647 FOLR2P14207 255 aa15.9■□□□□ 0.14
SEC13-217ENST00000482647 ADMP35318 185 aa15.9■□□□□ 0.14
SEC13-217ENST00000482647 RELQ04864 619 aaPredicted RBP15.9■□□□□ 0.14
SEC13-217ENST00000482647 UNQ9165/PRO28630Q6UXU0 137 aa15.9■□□□□ 0.14
SEC13-217ENST00000482647 MRAPQ8TCY5 172 aa15.9■□□□□ 0.14
SEC13-217ENST00000482647 UFC1Q9Y3C8 167 aa15.9■□□□□ 0.14
SEC13-217ENST00000482647 NDUFA4O00483 81 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 LY86O95711 162 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 SPNP16150 400 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 MLANAQ16655 118 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 ETFRF1Q6IPR1 90 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 C11orf87Q6NUJ2 197 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 NRARPQ7Z6K4 114 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 HAPLN4Q86UW8 402 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 UXS1Q8NBZ7 420 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 TMEM170AQ8WVE7 144 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 CIB3Q96Q77 187 aaPredicted RBP15.89■□□□□ 0.13
SEC13-217ENST00000482647 PRR25Q96S07 402 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 SEC22CQ9BRL7 303 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 MAGT1Q9H0U3 335 aa15.89■□□□□ 0.13
SEC13-217ENST00000482647 FNDC4Q9H6D8 234 aaPredicted RBP15.89■□□□□ 0.13
SEC13-217ENST00000482647 MPTX1A8MV57 137 aa15.88■□□□□ 0.13
SEC13-217ENST00000482647 K7EIL1 84 aa15.88■□□□□ 0.13
SEC13-217ENST00000482647 SYNGR2O43760 224 aa15.88■□□□□ 0.13
SEC13-217ENST00000482647 CBLN1P23435 193 aa15.88■□□□□ 0.13
SEC13-217ENST00000482647 ELLP55199 621 aaPredicted RBP15.88■□□□□ 0.13
SEC13-217ENST00000482647 RPP30P78346 268 aaKnown RBP15.88■□□□□ 0.13
SEC13-217ENST00000482647 OR4X1Q8NH49 305 aa15.88■□□□□ 0.13
SEC13-217ENST00000482647 TMEM190Q8WZ59 177 aa15.88■□□□□ 0.13
SEC13-217ENST00000482647 PRKDCP78527 4128 aaKnown RBP15.87■□□□□ 0.13
SEC13-217ENST00000482647 TMEM213A2RRL7 107 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 SCGB2A1O75556 95 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 TMEM50AO95807 157 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 IFNA4P05014 189 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 IL5P05113 134 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 IAPPP10997 89 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 SLC25A4P12235 298 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 ID3Q02535 119 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 IAH1Q2TAA2 248 aaPredicted RBP15.87■□□□□ 0.13
SEC13-217ENST00000482647 TM4SF20Q53R12 229 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 DEFB121Q5J5C9 76 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 ADAMTSL5Q6ZMM2 481 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 C12orf45Q8N5I9 185 aaPredicted RBP15.87■□□□□ 0.13
SEC13-217ENST00000482647 DYNLRB2Q8TF09 96 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 MARC2Q969Z3 335 aa15.87■□□□□ 0.13
SEC13-217ENST00000482647 TECRQ9NZ01 308 aaKnown RBP15.87■□□□□ 0.13
SEC13-217ENST00000482647 CLN5O75503 358 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 YIF1AO95070 293 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 NKX2-1P43699 371 aaPredicted RBP15.86■□□□□ 0.13
SEC13-217ENST00000482647 DCTN2Q13561 401 aaKnown RBP15.86■□□□□ 0.13
SEC13-217ENST00000482647 OR4D5Q8NGN0 318 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 OR2K2Q8NGT1 345 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 OR10C1Q96KK4 312 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 C20orf24Q9BUV8 137 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 GPN1Q9HCN4 374 aaPredicted RBP15.86■□□□□ 0.13
SEC13-217ENST00000482647 MRPL36Q9P0J6 103 aaKnown RBP15.86■□□□□ 0.13
SEC13-217ENST00000482647 MRPL27Q9P0M9 148 aaKnown RBP15.86■□□□□ 0.13
SEC13-217ENST00000482647 GSKIPQ9P0R6 139 aa15.86■□□□□ 0.13
SEC13-217ENST00000482647 TRAV30A0A087WSZ9 112 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 WRBO00258 174 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 GP9P14770 177 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 RAB11AP62491 216 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 DEFB114Q30KQ6 69 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 LCN12Q6JVE5 192 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 PRSS54Q6PEW0 395 aa15.85■□□□□ 0.13
SEC13-217ENST00000482647 DAZ1Q9NQZ3 744 aaKnown RBP15.85■□□□□ 0.13
SEC13-217ENST00000482647 C15orf62A8K5M9 175 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 INMT-MINDY4F8WBC2 141 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 K7EMT4 169 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 C8orf88P0DMB2 117 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 EDN2P20800 178 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 CD300EQ496F6 205 aaPredicted RBP15.84■□□□□ 0.13
SEC13-217ENST00000482647 ZBTB8BQ8NAP8 495 aaPredicted RBP15.84■□□□□ 0.13
SEC13-217ENST00000482647 TMEM116Q8NCL8 245 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 CACNG8Q8WXS5 425 aa15.84■□□□□ 0.13
SEC13-217ENST00000482647 FAM25EA8MYX2 175 aa15.83■□□□□ 0.12
SEC13-217ENST00000482647 GPX4P36969 197 aaPredicted RBP15.83■□□□□ 0.12
SEC13-217ENST00000482647 RND2P52198 227 aa15.83■□□□□ 0.12
SEC13-217ENST00000482647 POLR2GP62487 172 aaKnown RBP eCLIP15.83■□□□□ 0.12
SEC13-217ENST00000482647 CD69Q07108 199 aa15.83■□□□□ 0.12
SEC13-217ENST00000482647 ZNF600Q6ZNG1 722 aa15.83■□□□□ 0.12
SEC13-217ENST00000482647 MARVELD1Q9BSK0 173 aa15.83■□□□□ 0.12
SEC13-217ENST00000482647 PAIP2BQ9ULR5 123 aaKnown RBP15.83■□□□□ 0.12
SEC13-217ENST00000482647 SORL1Q92673 2214 aa15.82■□□□□ 0.12
SEC13-217ENST00000482647 IGHV3OR16-8A0A075B7F1 116 aa15.82■□□□□ 0.12
SEC13-217ENST00000482647 C5orf51A6NDU8 294 aa15.82■□□□□ 0.12
SEC13-217ENST00000482647 PRAF2O60831 178 aa15.82■□□□□ 0.12
SEC13-217ENST00000482647 SLC16A13Q7RTY0 426 aa15.82■□□□□ 0.12
SEC13-217ENST00000482647 SNRPGP15A8MWD9 76 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 CCSO14618 274 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 SSSCA1O60232 199 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 SCGB1D2O95969 90 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 SPANXN5Q5MJ07 72 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 TOMM20LQ6UXN7 152 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 OR1S2Q8NGQ3 325 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 NPIPB3Q92617 1050 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 ACY3Q96HD9 319 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 ZNF414Q96IQ9 312 aa15.81■□□□□ 0.12
SEC13-217ENST00000482647 MLXQ9UH92 298 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms