RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
CHRD-213ENST00000482014 OR4C16Q8NGL9 310 aa11.73□□□□□ -0.53
CHRD-213ENST00000482014 GLYATL2Q8WU03 294 aa11.73□□□□□ -0.53
CHRD-213ENST00000482014 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
CHRD-213ENST00000482014 SLIRPQ9GZT3 109 aaKnown RBP11.73□□□□□ -0.53
CHRD-213ENST00000482014 TMEM222Q9H0R3 208 aa11.73□□□□□ -0.53
CHRD-213ENST00000482014 GPR132Q9UNW8 380 aa11.73□□□□□ -0.53
CHRD-213ENST00000482014 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
CHRD-213ENST00000482014 CHEK1O14757 476 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 SPRY2O43597 315 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 GNG7O60262 68 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 RNASE2P10153 161 aaKnown RBP11.72□□□□□ -0.53
CHRD-213ENST00000482014 SNCAP37840 140 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 ETV6P41212 452 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 AARDQ4LEZ3 155 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 LHFPL5Q8TAF8 219 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
CHRD-213ENST00000482014 SOSTQ9BQB4 213 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
CHRD-213ENST00000482014 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
CHRD-213ENST00000482014 DNAH6Q9C0G6 4158 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 ANKRD20A5PA0PJZ0 165 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 H3BMQ9 156 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 NPBWR1P48145 328 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 DHODHQ02127 395 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 ODF3L2Q3SX64 289 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 FAM219AQ8IW50 185 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 SELENOHQ8IZQ5 122 aaKnown RBP11.71□□□□□ -0.53
CHRD-213ENST00000482014 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 RNF183Q96D59 192 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 RNF2Q99496 336 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 C6orf62Q9GZU0 229 aaPredicted RBP11.71□□□□□ -0.53
CHRD-213ENST00000482014 RSL24D1Q9UHA3 163 aaKnown RBP11.71□□□□□ -0.53
CHRD-213ENST00000482014 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.53
CHRD-213ENST00000482014 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 PRSS29PA6NIE9 313 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 CRYM-AS1A6NIL9 109 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 CORTO00230 105 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 YIF1AO95070 293 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 TMEM50AO95807 157 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 IFNA4P05014 189 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 TNFSF8P32971 234 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 SUB1P53999 127 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRD-213ENST00000482014 BSXQ3C1V8 233 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 OR51S1Q8NGJ8 323 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 OR52E5Q8NH55 327 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 RBPMSQ93062 196 aaKnown RBP11.7□□□□□ -0.54
CHRD-213ENST00000482014 PRRT1Q99946 306 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 MFFQ9GZY8 342 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 FAT2Q9NYQ8 4349 aa11.7□□□□□ -0.54
CHRD-213ENST00000482014 HOXA1P49639 335 aaPredicted RBP11.69□□□□□ -0.54
CHRD-213ENST00000482014 APOC4P55056 127 aa11.69□□□□□ -0.54
CHRD-213ENST00000482014 SPCS3P61009 180 aa11.69□□□□□ -0.54
CHRD-213ENST00000482014 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
CHRD-213ENST00000482014 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
CHRD-213ENST00000482014 RNASE11Q8TAA1 199 aaKnown RBP11.69□□□□□ -0.54
CHRD-213ENST00000482014 GPR146Q96CH1 333 aa11.69□□□□□ -0.54
CHRD-213ENST00000482014 FNDC4Q9H6D8 234 aaPredicted RBP11.69□□□□□ -0.54
CHRD-213ENST00000482014 ENY2Q9NPA8 101 aa11.69□□□□□ -0.54
CHRD-213ENST00000482014 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
CHRD-213ENST00000482014 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 UBE2CO00762 179 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
CHRD-213ENST00000482014 MLANAQ16655 118 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 ZNF600Q6ZNG1 722 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 C2CD4CQ8TF44 421 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 TMEM230Q96A57 120 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 MRPL36Q9P0J6 103 aaKnown RBP11.68□□□□□ -0.54
CHRD-213ENST00000482014 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 DNAH11Q96DT5 4516 aa11.68□□□□□ -0.54
CHRD-213ENST00000482014 DYNC1H1Q14204 4646 aaKnown RBP11.67□□□□□ -0.54
CHRD-213ENST00000482014 FABP12A6NFH5 140 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 OR4X1Q8NH49 305 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 MCFD2Q8NI22 146 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 VSIRQ9H7M9 311 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 SCP2D1Q9UJQ7 156 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 PUS1Q9Y606 427 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRD-213ENST00000482014 DNAH2Q9P225 4427 aa11.67□□□□□ -0.54
CHRD-213ENST00000482014 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 A0A1B0GU03 582 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 CLN5O75503 358 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 APOHP02749 345 aaPredicted RBP11.66□□□□□ -0.54
CHRD-213ENST00000482014 HTR2BP41595 481 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 CMC4P56277 68 aaPredicted RBP11.66□□□□□ -0.54
CHRD-213ENST00000482014 TMEM187Q14656 261 aa11.66□□□□□ -0.54
CHRD-213ENST00000482014 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms