RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 APOA2P02652 100 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 IL3RAP26951 378 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 GCHFRP30047 84 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 DEFA6Q01524 100 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 JOSD1Q15040 202 aaPredicted RBP11.64□□□□□ -0.55
CHD3-211ENST00000481999 FBLN7Q53RD9 439 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 TMEM144Q7Z5S9 345 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 SFRP2Q96HF1 295 aa11.64□□□□□ -0.55
CHD3-211ENST00000481999 MDFIC2A0A1B0GVS7 189 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 IGLV1-47P01700 117 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 IGLV2-23P01705 113 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 LGALS4P56470 323 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 PKIAP61925 76 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 AURKAIP1Q9NWT8 199 aaPredicted RBP11.63□□□□□ -0.55
CHD3-211ENST00000481999 ZNF257Q9Y2Q1 563 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 A0A087X0M5 115 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 A0A1B0GX30 115 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 REG1AP05451 166 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 ZNF114Q8NC26 417 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
CHD3-211ENST00000481999 SEPSECSQ9HD40 501 aaKnown RBP11.63□□□□□ -0.55
CHD3-211ENST00000481999 TRBV20OR9-2A0A075B6H5 130 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 SCO2A0A1W2PP80 73 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 ZFP36P26651 326 aaKnown RBP11.62□□□□□ -0.55
CHD3-211ENST00000481999 HLA-DRB5Q30154 266 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 OR4P4Q8NGL7 312 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 ZNF596Q8TC21 504 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PLEKHA3Q9HB20 300 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 YTHDF2Q9Y5A9 579 aaKnown RBP11.62□□□□□ -0.55
CHD3-211ENST00000481999 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 A0A0U1RQK1 487 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PGPEP1LA6NFU8 196 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PRR20EP86478 221 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PRR20CP86479 221 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PRR20DP86480 221 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PRR20BP86481 221 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 PRR20AP86496 221 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 SGMS2Q8NHU3 365 aa11.62□□□□□ -0.55
CHD3-211ENST00000481999 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
CHD3-211ENST00000481999 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 ATP5IP56385 69 aaPredicted RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 RPL15P61313 204 aaKnown RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 LINC00311Q8N616 119 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 HILPDAQ9Y5L2 63 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 GATA2P23769 480 aaPredicted RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 RPL8P62917 257 aaKnown RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 WT1-ASQ06250 92 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 MRGPRG-AS1Q2M3A8 158 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 TMEM177Q53S58 311 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 SPATA31B1PQ5VZV4 182 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 C11orf52Q96A22 123 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 UHRF2Q96PU4 802 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 SSBP3Q9BWW4 388 aaPredicted RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 CLEC7AQ9BXN2 247 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 BET1LQ9NYM9 111 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 WASHC3Q9Y3C0 194 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 ABCA12Q86UK0 2595 aa11.61□□□□□ -0.55
CHD3-211ENST00000481999 USP9YO00507 2555 aaPredicted RBP11.61□□□□□ -0.55
CHD3-211ENST00000481999 IGKV1OR2-108A0A075B7D4 117 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 GZMBP10144 247 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 IGFBP2P18065 325 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 TMEM18Q96B42 140 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 TIMD4Q96H15 378 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 TRAPPC1Q9Y5R8 145 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 IGHV1-3A0A0C4DH29 117 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 GCGP01275 180 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 ZNF137PP52743 207 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 RUSC1-AS1Q66K80 236 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 TEX38Q6PEX7 206 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 FKBP11Q9NYL4 201 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
CHD3-211ENST00000481999 UBR5O95071 2799 aaPredicted RBP11.6□□□□□ -0.55
CHD3-211ENST00000481999 AREGP15514 252 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 DDTP30046 118 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 PDPNQ86YL7 162 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 INSIG2Q9Y5U4 225 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 A6NNC1 897 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 C9JCJ5 164 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 LIPFP07098 398 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 LINC00869P0C866 280 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 PLA2G2AP14555 144 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 NEU4Q8WWR8 484 aaPredicted RBP11.59□□□□□ -0.55
CHD3-211ENST00000481999 BPESC1Q9GZL8 116 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 LPAR2Q9HBW0 351 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms