RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 WASHC3Q9Y3C0 194 aa9.29□□□□□ -0.92
HPS4-212ENST00000481910 A0A0D9SG52 128 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 ARPC1BO15143 372 aaKnown RBP9.28□□□□□ -0.92
HPS4-212ENST00000481910 HOXA3O43365 443 aaPredicted RBP9.28□□□□□ -0.92
HPS4-212ENST00000481910 FCGR3BO75015 233 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 VENTXO95231 258 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 IGKV1D-33P01593 117 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 IGKV1-33P01594 117 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 IGHV4-59P01825 116 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 F2RP25116 425 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 RND3P61587 244 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 RTL8BQ17RB0 113 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 ZNF418Q8TF45 676 aaPredicted RBP9.28□□□□□ -0.92
HPS4-212ENST00000481910 CASTOR1Q8WTX7 329 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 SSMEM1Q8WWF3 244 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 TNFRSF19Q9NS68 423 aa9.28□□□□□ -0.92
HPS4-212ENST00000481910 NSD1Q96L73 2696 aaPredicted RBP9.28□□□□□ -0.92
HPS4-212ENST00000481910 FAM90A9PA6NNJ1 464 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 IGKV1-16P04430 117 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 FBLN7Q53RD9 439 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 TMEM128Q5BJH2 165 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 SLC35E3Q7Z769 313 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 OR2T10Q8NGZ9 312 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 FLYWCH2Q96CP2 140 aaKnown RBP9.27□□□□□ -0.93
HPS4-212ENST00000481910 C20orf144Q9BQM9 153 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 GPN1Q9HCN4 374 aaPredicted RBP9.27□□□□□ -0.93
HPS4-212ENST00000481910 TEP1Q99973 2627 aaKnown RBP9.27□□□□□ -0.93
HPS4-212ENST00000481910 C3orf85A0A1B0GTC6 90 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 MOSP00540 346 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 OR13C7P0DN81 318 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 AREGP15514 252 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 BRWD1-AS2P59051 145 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 RHEBQ15382 184 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 LY6EQ16553 131 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 ACOT7LQ6ZUV0 252 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 PDPNQ86YL7 162 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 OR4C13Q8NGP0 309 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 TMEM230Q96A57 120 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 DUX5Q96PT3 197 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 ARL6Q9H0F7 186 aa9.27□□□□□ -0.93
HPS4-212ENST00000481910 LIN7CQ9NUP9 197 aaKnown RBP9.27□□□□□ -0.93
HPS4-212ENST00000481910 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 FGF16O43320 207 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 KIR2DS2P43631 304 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 TAS2R31P59538 309 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 RPS16P62249 146 aaKnown RBP9.26□□□□□ -0.93
HPS4-212ENST00000481910 EBI3Q14213 229 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 VAMP3Q15836 100 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 SP6Q3SY56 376 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 NAA60Q9H7X0 242 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 BEX1Q9HBH7 125 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 TCF19Q9Y242 345 aa9.26□□□□□ -0.93
HPS4-212ENST00000481910 SIVA1O15304 175 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 BAXQ07812 192 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 SLC25A42Q86VD7 318 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 TMEM219Q86XT9 240 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 TCTEX1D1Q8N7M0 179 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 RITA1Q96K30 269 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 MXRA5Q9NR99 2828 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 DNAJC9-AS1A6NH13 148 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 PPP5D1E7EU14 171 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 G3V4G9 280 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 H0Y980 276 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 M0QZ24 198 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 RBFOX2O43251 390 aaKnown RBP eCLIP9.25□□□□□ -0.93
HPS4-212ENST00000481910 PDE6DO43924 150 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 SERPINE2P07093 398 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 FABP4P15090 132 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 ID1P41134 155 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 LPAR6P43657 344 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
HPS4-212ENST00000481910 HILS1P60008 231 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 SUPT4H1P63272 117 aaKnown RBP9.25□□□□□ -0.93
HPS4-212ENST00000481910 OR4A47Q6IF82 309 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 OSR1Q8TAX0 266 aaPredicted RBP9.25□□□□□ -0.93
HPS4-212ENST00000481910 HIST1H2BLQ99880 126 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 RNF5Q99942 180 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 VAX2Q9UIW0 290 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 VPREB3Q9UKI3 123 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 COX11Q9Y6N1 276 aa9.25□□□□□ -0.93
HPS4-212ENST00000481910 A6NDX4 124 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 NCBP2LA6PVI3 153 aaKnown RBP9.24□□□□□ -0.93
HPS4-212ENST00000481910 OR7C2O60412 319 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 F2RL1P55085 397 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 UBE2MP61081 183 aaKnown RBP9.24□□□□□ -0.93
HPS4-212ENST00000481910 PPP1R1AQ13522 171 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 MMDQ15546 238 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 ZNF585BQ52M93 769 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 TMEM177Q53S58 311 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 TMEM86BQ8N661 226 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 JMJD8Q96S16 334 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 CHIAQ9BZP6 476 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 ESM1Q9NQ30 184 aa9.24□□□□□ -0.93
HPS4-212ENST00000481910 MRPL27Q9P0M9 148 aaKnown RBP9.24□□□□□ -0.93
HPS4-212ENST00000481910 HLA-AP01891 365 aaKnown RBP9.23□□□□□ -0.93
HPS4-212ENST00000481910 VSIG10L2P0DP72 767 aa9.23□□□□□ -0.93
HPS4-212ENST00000481910 CNTFRP26992 372 aa9.23□□□□□ -0.93
HPS4-212ENST00000481910 PJVKQ0ZLH3 352 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms