RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 C21orf140B9A014 251 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 H0Y980 276 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 M0QZ92 97 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 CXCR6O00574 342 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 DEXIO95424 95 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 TYMSP04818 313 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 C8orf88P0DMB2 117 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 LAMA1P25391 3075 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 OR4D2P58180 307 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 UBE2IP63279 158 aaKnown RBP0.68□□□□□ -2.3
CALD1-219ENST00000480638 PPP1R1AQ13522 171 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 COQ5Q5HYK3 327 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 TEX36Q5VZQ5 186 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 MRPL57Q9BQC6 102 aaKnown RBP0.68□□□□□ -2.3
CALD1-219ENST00000480638 DRC3Q9H069 523 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 MAP1LC3AQ9H492 121 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 NKIRAS1Q9NYS0 192 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 UBAP1Q9NZ09 502 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 DKKL1Q9UK85 242 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 POLR1DQ9Y2S0 133 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 PXMP4Q9Y6I8 212 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 ANK2Q01484 3957 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 CUBNO60494 3623 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 STRCQ7RTU9 1775 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 MRC2Q9UBG0 1479 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 MYO3BQ8WXR4 1341 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 TRAV14DV4A0A0A6YYC5 116 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 OR4C45A6NMZ5 311 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 TGOLN2O43493 480 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 METTL15P1P0C7V9 234 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 NFYAP23511 347 aaPredicted RBP0.67□□□□□ -2.3
CALD1-219ENST00000480638 RPS12P25398 132 aaKnown RBP0.67□□□□□ -2.3
CALD1-219ENST00000480638 ITGB3BPQ13352 177 aaPredicted RBP0.67□□□□□ -2.3
CALD1-219ENST00000480638 ZNF846Q147U1 533 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 CDK10Q15131 360 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 CST9Q5W186 159 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 COMMD7Q86VX2 200 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 TMEM161BQ8NDZ6 487 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 MNS1Q8NEH6 495 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 GPR32P1Q8NGA4 272 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 OR8J2Q8NGG1 315 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 PTH2Q96A98 100 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 PAQR5Q9NXK6 330 aaPredicted RBP0.67□□□□□ -2.3
CALD1-219ENST00000480638 BIVM-ERCC5R4GMW8 1640 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 LAMA5O15230 3695 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 ABCC10Q5T3U5 1492 aa0.67□□□□□ -2.3
CALD1-219ENST00000480638 RP1P56715 2156 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 TET3O43151 1660 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 CUX1P39880 1505 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 PFDN6O15212 129 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 IGHV3-7P01780 117 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 OCM2P0CE71 109 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 RPL12P30050 165 aaKnown RBP0.66□□□□□ -2.3
CALD1-219ENST00000480638 RUNX1Q01196 453 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 C1orf195Q5TG92 126 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 PTRHD1Q6GMV3 140 aaKnown RBP0.66□□□□□ -2.3
CALD1-219ENST00000480638 SFXN4Q6P4A7 337 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 CD200R1LQ6Q8B3 271 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 LRRN1Q6UXK5 716 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 C10orf67Q8IYJ2 551 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 Q8N402 240 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 AQP3Q92482 292 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 RAB8BQ92930 207 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 XPNPEP1Q9NQW7 623 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 FKBP14Q9NWM8 211 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 USE1Q9NZ43 259 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 OR5AC2Q9NZP5 309 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 KIF21BO75037 1637 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 MADDQ8WXG6 1647 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 USH2AO75445 5202 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 ABCC11Q96J66 1382 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 MAP3K5Q99683 1374 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 KMT2AQ03164 3969 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 XIRP1Q702N8 1843 aaKnown RBP0.66□□□□□ -2.3
CALD1-219ENST00000480638 NRKQ7Z2Y5 1582 aa0.66□□□□□ -2.3
CALD1-219ENST00000480638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.3
CALD1-219ENST00000480638 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.65□□□□□ -2.31
CALD1-219ENST00000480638 TGIF2-C20orf24A0A0A6YYL0 155 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 GGT3PA6NGU5 568 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 DISC1C4P0D8 188 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 LRRN3E7EW58 273 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 KCNK1O00180 336 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 SLC16A4O15374 487 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 SSNA1O43805 119 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 E2F6O75461 281 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 LYPLA2O95372 231 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 IFNA5P01569 189 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 C1QAP02745 245 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 KRT7P08729 469 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 NKX2-5P52952 324 aaPredicted RBP0.65□□□□□ -2.31
CALD1-219ENST00000480638 SUPT4H1P63272 117 aaKnown RBP0.65□□□□□ -2.31
CALD1-219ENST00000480638 RPL18Q07020 188 aaKnown RBP0.65□□□□□ -2.31
CALD1-219ENST00000480638 RSU1Q15404 277 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 ALKAL1Q6UXT8 129 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 SLC51BQ86UW2 128 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 TMEM86BQ8N661 226 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 OR2T4Q8NH00 348 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 PIGXQ8TBF5 258 aa0.65□□□□□ -2.31
CALD1-219ENST00000480638 OR51I1Q9H343 314 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms