RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 HSPB11Q9Y547 144 aa9.73□□□□□ -0.85
TRAPPC12-218ENST00000479897 TSSC4Q9Y5U2 329 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-218ENST00000479897 FBN1P35555 2871 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 LGALS1P09382 135 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 CD28P10747 220 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 S100A11P31949 105 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 DEFA5Q01523 94 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 CD300CQ08708 224 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 SLC38A11Q08AI6 406 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 ARL16Q0P5N6 197 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 OR8G2PQ6IF36 304 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 ZNF343Q6P1L6 599 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 ACOT7LQ6ZUV0 252 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 ZNF546Q86UE3 836 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 OR11H4Q8NGC9 324 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 C4orf3Q8WVX3 66 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 CCDC140Q96MF4 163 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 GAR1Q9NY12 217 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 PAIP2BQ9ULR5 123 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-218ENST00000479897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 I3L521 148 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 CST7O76096 145 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 NUP62P37198 522 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 MFAP4P55083 255 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 ATP6V1FQ16864 119 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 VWC2Q2TAL6 325 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 KRTAP21-3Q3LHN1 58 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 NDUFA11Q86Y39 141 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 INO80EQ8NBZ0 244 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 SLC35E1Q96K37 410 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 HYLS1Q96M11 299 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 CITED2Q99967 270 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 ZNF747Q9BV97 191 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 GNB4Q9HAV0 340 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 COL6A5A8TX70 2615 aa9.71□□□□□ -0.86
TRAPPC12-218ENST00000479897 TENM1Q9UKZ4 2725 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 NPBWR1P48145 328 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 NHLH2Q02577 135 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 OR2F1Q13607 317 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 GAMTQ14353 236 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 TMEM217Q8N7C4 229 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 OR1S2Q8NGQ3 325 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 OR5C1Q8NGR4 320 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 MRPL36Q9P0J6 103 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-218ENST00000479897 IGHV3-21A0A0B4J1V1 117 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 ARPC5O15511 151 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 PFDN1O60925 122 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 CLN5O75503 358 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 RND2P52198 227 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 ZFP69Q49AA0 526 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 ACSM6Q6P461 480 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 SPSB3Q6PJ21 355 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 TMEM144Q7Z5S9 345 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 LILRB2Q8N423 598 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 THAP8Q8NA92 274 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 BSCL2Q96G97 398 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 MFFQ9GZY8 342 aa9.69□□□□□ -0.86
TRAPPC12-218ENST00000479897 TRAV30A0A087WSZ9 112 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 TGOLN2O43493 480 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 DFFBO76075 338 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 IGHV3-11P01762 117 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 MLANAQ16655 118 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 C12orf54Q6X4T0 127 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 KCNRGQ8N5I3 272 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 C11orf44Q8N8P7 122 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 KLHL30-AS1Q8NEE0 82 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 ATP5SQ99766 215 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 PARD6GQ9BYG4 376 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 ZC4H2Q9NQZ6 224 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 UQCC1Q9NVA1 299 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 PEF1Q9UBV8 284 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 FBXL17Q9UF56 701 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 S4R3C0 116 aa9.68□□□□□ -0.86
TRAPPC12-218ENST00000479897 ANK2Q01484 3957 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 IGKV1OR2-108A0A075B7D4 117 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 A0A0D9SG52 128 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 GNG7O60262 68 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 IGHV3-48P01763 117 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 GPR183P32249 361 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 ADMP35318 185 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 AKR1C1Q04828 323 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 FHL3Q13643 280 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 Q56UQ5 140 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 CLEC19AQ6UXS0 136 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 NPIPB3Q92617 1050 aa9.67□□□□□ -0.86
TRAPPC12-218ENST00000479897 ACY3Q96HD9 319 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms