RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 DEDDO75618 318 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 BPNT1O95861 308 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 HBZP02008 142 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 SRP19P09132 144 aaKnown RBP5.23□□□□□ -1.57
VCP-205ENST00000479300 NHLRC4P0CG21 123 aaPredicted RBP5.23□□□□□ -1.57
VCP-205ENST00000479300 OR13C7P0DN81 318 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 AKR1C4P17516 323 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 MYCNOSP40205 109 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 RPL23AP62750 156 aaKnown RBP5.23□□□□□ -1.57
VCP-205ENST00000479300 RBX1P62877 108 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 ZNF616Q08AN1 781 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 ZNF260Q3ZCT1 412 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 PDZD11Q5EBL8 140 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 ZNF506Q5JVG8 444 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 C1orf100Q5SVJ3 147 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 TEX38Q6PEX7 206 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 SLC25A48Q6ZT89 311 aaKnown RBP5.23□□□□□ -1.57
VCP-205ENST00000479300 ZNF329Q86UD4 541 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 SLC35G3Q8N808 338 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 KLHL30-AS1Q8NEE0 82 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 KCNG3Q8TAE7 436 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 MUC7Q8TAX7 377 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 RTN4IP1Q8WWV3 396 aaPredicted RBP5.23□□□□□ -1.57
VCP-205ENST00000479300 FAM46BQ96A09 425 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 TMEM18Q96B42 140 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 GALMQ96C23 342 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 ASCL2Q99929 193 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 C20orf144Q9BQM9 153 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 NIPSNAP3BQ9BS92 247 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 URM1Q9BTM9 101 aaKnown RBP5.23□□□□□ -1.57
VCP-205ENST00000479300 TMEM59Q9BXS4 323 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 SRD5A3Q9H8P0 318 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 JPT1Q9UK76 154 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 RAB22AQ9UL26 194 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 GPR132Q9UNW8 380 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 ZNF705GA8MUZ8 300 aaPredicted RBP5.22□□□□□ -1.57
VCP-205ENST00000479300 E5RGE8 158 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 IGHG2P01859 326 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 HBE1P02100 147 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 IL6RP08887 468 aaPredicted RBP5.22□□□□□ -1.57
VCP-205ENST00000479300 ECI1P42126 302 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 GPR12P47775 334 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 THBS3P49746 956 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 S100A10P60903 97 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 EBI3Q14213 229 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 DIAPH2-AS1Q14236 149 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 PLGLAQ15195 96 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ZNF343Q6P1L6 599 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 MOB1BQ7L9L4 216 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 SMIM15Q7Z3B0 74 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ZNF429Q86V71 674 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ZNF695Q8IW36 515 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 FAM219AQ8IW50 185 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 OR1L1Q8NH94 360 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 MARCH1Q8TCQ1 289 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 TMEM230Q96A57 120 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 RBMXL1Q96E39 390 aaKnown RBP5.22□□□□□ -1.57
VCP-205ENST00000479300 Q96M66 194 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 PRR25Q96S07 402 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 S1PR3Q99500 378 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 P2RX4Q99571 388 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ABHD14AQ9BUJ0 271 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 PLEKHJ1Q9NW61 149 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ZNF581Q9P0T4 197 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 LINC00527Q9UJ94 153 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ZFP30Q9Y2G7 519 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 NSG2Q9Y328 171 aa5.22□□□□□ -1.57
VCP-205ENST00000479300 ZNF727A8MUV8 499 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 HSBP1L1C9JCN9 74 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 CIDEAO60543 219 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 YPEL1O60688 119 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 SCAF4O95104 1147 aaKnown RBP5.21□□□□□ -1.58
VCP-205ENST00000479300 PPBPP02775 128 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 PRH1P02810 166 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 ELANEP08246 267 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 BLVRBP30043 206 aaPredicted RBP5.21□□□□□ -1.58
VCP-205ENST00000479300 OR10J1P30954 320 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 HRH1P35367 487 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 SELENOTP62341 195 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 HLA-DRB3P79483 266 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 HTD2P86397 168 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 FOXE3Q13461 319 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 MMDQ15546 238 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 ACOT6Q3I5F7 207 aaPredicted RBP5.21□□□□□ -1.58
VCP-205ENST00000479300 ANKRD55Q3KP44 614 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 MORN2Q502X0 79 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 CT45A1Q5HYN5 189 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 COL5A1-AS1Q5SY13 56 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 UTF1Q5T230 341 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 LEMD1Q68G75 181 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 DPPA3Q6W0C5 159 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 SSX7Q7RTT5 188 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 Q8N9W7 124 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 TMEM104Q8NE00 496 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 OR52L2PQ8NGH6 319 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 CT45A3Q8NHU0 189 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 IL1F10Q8WWZ1 152 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 OR10C1Q96KK4 312 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 DUX3Q96PT4 197 aa5.21□□□□□ -1.58
VCP-205ENST00000479300 YPEL2Q96QA6 119 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms